Protein

Genbank accession
YP_009795202.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MATNIRTVITYALDGSKTDFTIPFEYLARKFVVVTLIGVDRRELVLTTDYRFATKTVISTTIAWGAAQGYTSIEIRRFTSATERLVDFTDGSILRAYDLNVSQLQTIHVAEEARDMTAETIGVNNDGNLDARGRRIVNVADAVDSGDAINLGQVLQQNQNAWQARDEALGFRNEAEGFRNVATDRANVATQQAAVATDRANVATQQAADAEFQANRATQMNSEASFWNSLARRWASEDTNIVVENGLYSARHYAILAASYRDNAVASAIAASNEASRSKTEADRAKTEADKLGNWNALAGTIDSVSGPNVSWKGIISAPSVHATSNAGYILMEPNANNPALTPIITFKGFRGNPDANVMWIGGDTGDSGAAMAHGMFSVNTGQHFQFNVDGSSHIGSMNNSASILLGPPSSPNMTLSTLNGNGIVNVEGNMSVSGVIETRAIELGKYGTWPFIDFHSSAELVDYNVRVVAFNAPDAATTGRGQLFIEAGSGLVTSHDVEARGAVYSGGLSGGKLTSTGNIEGSEWGSRTLKGYVDDSRKASLHASPLRMLWRRDIGTFNTSFDSNGYPLPADASRPLTVRPWGNGQSYTFSEPLWGKQLFSIHSDGFRGMNSGQNQFNFCRAWGAIPRMVGVTATADNGNVITFTSFELMVGSGWWHFALSQDGLTLALMSTGDNGRPIYALYIADIP
Physico‐chemical
properties
protein length:688 AA
molecular weight: 74000,25340 Da
isoelectric point:5,34613
aromaticity:0,08866
hydropathy:-0,22166

Domains

Domains [InterPro]
IPR005604
1–131
IPR005604
YP_009795202.1
1 688
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage DU_PP_II
[NCBI] 		2041489 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009795202.1 [NCBI]
Genbank nucleotide accession
NC_047886.1 [NCBI]
CDS location
range 34365 -> 36431
strand +
CDS
ATGGCTACAAACATCAGGACAGTCATAACTTATGCTCTGGATGGCTCAAAGACAGACTTCACGATACCCTTTGAGTATCTAGCCCGTAAGTTCGTAGTGGTCACACTTATTGGTGTAGACCGCCGTGAGCTGGTCTTAACGACCGACTACAGGTTCGCAACCAAGACGGTTATCTCAACGACTATCGCTTGGGGTGCGGCACAAGGTTATACCTCAATTGAGATTCGTCGATTCACATCAGCCACTGAGAGATTAGTGGACTTTACTGATGGTTCTATCTTAAGGGCTTATGACCTTAATGTATCTCAGTTACAGACCATTCATGTTGCTGAGGAAGCGCGTGATATGACAGCAGAGACTATTGGTGTTAACAATGATGGTAACCTTGACGCTCGTGGTCGTCGTATTGTTAATGTTGCAGATGCAGTTGATTCAGGGGACGCCATTAACTTAGGTCAGGTCTTACAGCAGAACCAGAACGCATGGCAGGCTCGTGATGAGGCTTTAGGCTTCCGTAATGAAGCTGAAGGTTTCCGTAATGTTGCCACTGACCGTGCGAACGTAGCGACTCAACAGGCAGCAGTGGCAACCGACCGTGCGAACGTAGCGACTCAACAGGCAGCAGACGCAGAGTTCCAAGCTAATCGCGCCACTCAGATGAACTCTGAGGCGTCTTTCTGGAACTCACTGGCTCGTCGCTGGGCGTCAGAGGATACCAATATAGTCGTAGAGAATGGTCTGTATTCAGCACGCCATTATGCCATCCTAGCGGCTAGCTATCGGGACAATGCTGTGGCGTCCGCTATTGCAGCCAGTAATGAGGCATCCCGCTCCAAGACTGAGGCTGATCGGGCTAAGACTGAGGCTGACAAGCTGGGTAACTGGAATGCCCTAGCAGGCACCATTGATTCAGTAAGTGGCCCTAACGTTTCATGGAAAGGAATCATCTCAGCACCGTCTGTACATGCAACCAGTAACGCAGGGTACATCTTAATGGAACCTAACGCCAACAATCCGGCGCTGACACCTATCATCACCTTTAAGGGATTCCGTGGGAACCCTGATGCTAACGTGATGTGGATTGGTGGGGACACTGGAGACTCAGGTGCGGCGATGGCGCATGGGATGTTCTCAGTGAACACTGGACAACACTTCCAGTTCAACGTTGACGGGTCAAGTCATATCGGGTCTATGAACAATAGCGCATCGATTCTACTAGGGCCTCCGAGTTCCCCTAACATGACCTTATCGACCCTTAATGGGAACGGTATAGTGAACGTGGAAGGGAACATGAGCGTGTCCGGTGTGATTGAGACTCGTGCTATCGAGCTGGGTAAGTACGGCACGTGGCCATTCATTGACTTCCATAGCAGCGCTGAACTAGTGGACTATAACGTCCGTGTGGTTGCTTTTAATGCGCCAGATGCAGCAACTACTGGTCGTGGTCAATTGTTCATTGAAGCAGGCAGCGGCCTTGTGACCTCGCATGATGTGGAGGCTCGTGGTGCAGTCTACTCAGGTGGGCTTAGTGGTGGTAAGCTGACCAGTACGGGTAACATTGAGGGGTCTGAATGGGGTTCACGAACTCTTAAAGGCTACGTCGATGATTCTCGTAAAGCTTCCCTCCATGCATCCCCTCTGCGTATGTTATGGCGTAGAGACATTGGCACGTTCAACACCAGCTTCGACTCGAATGGTTATCCTCTACCAGCGGACGCCTCAAGACCTCTTACGGTTCGACCATGGGGAAATGGCCAGTCGTACACGTTCAGTGAGCCTCTATGGGGCAAGCAGTTGTTCTCTATCCATAGTGATGGCTTCAGAGGGATGAACTCCGGTCAGAACCAGTTTAACTTCTGCCGCGCATGGGGTGCAATCCCTCGCATGGTCGGAGTGACGGCTACGGCTGATAATGGGAACGTGATTACCTTCACGAGCTTCGAGCTGATGGTAGGCTCTGGATGGTGGCACTTCGCACTGAGTCAGGACGGTCTGACGCTGGCACTTATGAGCACAGGCGATAATGGTCGTCCTATCTATGCGCTATACATTGCGGACATTCCGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
6eded86b18bc1ae566b393a5d863ccc2fdeaac8b1c7791929632d83462fa39d1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5719
Evidence 0,5719
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage (DU_PP_II) infecting Pectobacterium spp. Park,T.-H. 2017-11-22 — GenBank