Protein

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Genbank accession
ASR73865.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAIDNGNYIAGMNINIPAPTDPRYEGADQIKAVKRMVQESFPNIDGEVTATVSELNKMTDGTQGRFIGETTMFQGLIEDIPVGWVLSDGTIQNGFQTADLRNKFIMGYDDVQSVAQPIRSTGGENNPDLSTHLVSEEHTLVLAEIPAHKHPLDYNATGSGGGGTGPDVKGGSGAETEEVGGGQPHSHGLTAEVDNEGVPTFDNRPEYVVLAFIVYVGQAA
Physico‐chemical
properties
protein length:220 AA
molecular weight: 23343,47060 Da
isoelectric point:4,40345
aromaticity:0,06364
hydropathy:-0,36091

Domains

Domains [InterPro]
DC_0570
ATT
1–65
DC_0570 SSF88874
cd22641
STR
45–216
cd22641
ASR73865.1
1 220
Architecture
ATT
STR
ATT 1-65 | STR 66-216 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_ValP_IME271
[NCBI] 		2024229 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASR73865.1 [NCBI]
Genbank nucleotide accession
MF431726.1 [NCBI]
CDS location
range 35830 -> 36492
strand -
CDS
ATGGCAATTGATAATGGTAACTACATTGCTGGAATGAACATCAACATCCCTGCACCTACAGACCCTCGATATGAGGGTGCTGACCAGATTAAAGCTGTAAAGCGAATGGTACAGGAATCATTCCCAAATATTGATGGTGAGGTTACTGCTACAGTATCTGAACTAAACAAAATGACTGATGGTACACAAGGTCGCTTCATTGGTGAGACTACAATGTTCCAAGGTCTTATTGAAGACATCCCAGTTGGTTGGGTACTTTCTGATGGTACTATCCAGAATGGTTTCCAAACAGCGGATTTACGAAATAAATTCATTATGGGCTATGATGATGTGCAATCTGTGGCTCAACCTATCCGCTCAACTGGTGGTGAGAACAACCCTGACCTATCGACACACTTGGTTTCAGAAGAACATACTCTTGTTCTAGCAGAGATTCCAGCTCACAAACACCCACTAGATTATAATGCAACAGGTTCTGGTGGTGGTGGTACTGGTCCAGATGTTAAAGGTGGTTCTGGTGCTGAGACTGAAGAAGTAGGTGGTGGTCAACCACACAGTCACGGACTGACAGCAGAAGTTGATAACGAAGGCGTACCAACATTTGATAACCGACCAGAGTACGTTGTACTAGCATTCATTGTATACGTTGGTCAAGCAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f56991f8d68488b72d69ae9abfb0f0b0826e80b259f4b183a837f7437606289b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6556
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and biological characterization of Podoviridae bacteriophage vB_ValP_IME271 infecting Vibrio alginolyticus Li,F., Li,L., Sun,Q., Xing,S., Zhou,L. and Tong,Y.-G. 2019-01-09 — GenBank