Protein

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Genbank accession
ATW59294.1 [GenBank]
Protein name
alpha-L-arabinofuranosidase
RBP type
TF
Evidence RBPdetect
Probability 0,83
Protein sequence
MRPSTRIVVLNSKKYALDLISAVAATAYSLRRLYASYTGAAIRVRRSSDNAERDIGFIGEHLDLFSLFTFVGSGNGFATTWYDQSGNGRHVSQATTANQPTYQATGLNNKPALHFNGGDFFNNISVSLPLFSVSLVETATQNTNVIYYPVGFGLGGISVGGSYFSQKFAINGSNSLVTTENSVLNAPTIVFAGSDNLGCQIAVNGNAPATDLTAQSITQISIGRRSDGFWPFFGSISEVIFFPSLLSTTARKTLERNQGIYFDISI
Physico‐chemical
properties
protein length:266 AA
molecular weight: 28607,65050 Da
isoelectric point:8,68571
aromaticity:0,11654
hydropathy:0,03195

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
17–120
G3DSA:2.60.120.200
IPR015289
Unmapped
26–104
IPR015289
DC_0797
STR
35–266
DC_0797
ATW59294.1
1 266
Architecture
STR
STR 17-266
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aphanizomenon phage vB_AphaS-CL131
[NCBI] 		2047766 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aphanizomenon flos-aquae
[NCBI] 		1176 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATW59294.1 [NCBI]
Genbank nucleotide accession
MG209611 [NCBI]
CDS location
range 20853 -> 21653
strand +
CDS
ATGAGACCTTCTACTAGAATAGTGGTGCTTAATAGCAAGAAATACGCTCTTGATTTAATCTCTGCGGTAGCTGCGACTGCTTACTCGCTAAGACGGCTTTACGCATCTTACACTGGAGCGGCAATAAGAGTGCGAAGAAGTAGCGATAATGCAGAAAGAGATATAGGGTTTATTGGAGAGCATTTAGATTTATTTTCGTTATTCACGTTTGTCGGTTCTGGCAACGGCTTTGCCACCACTTGGTATGACCAGTCAGGCAATGGTCGTCATGTATCACAGGCAACTACGGCGAATCAACCGACGTATCAGGCAACGGGATTGAATAATAAACCCGCGCTGCACTTTAATGGAGGCGATTTTTTTAACAATATAAGCGTATCTCTGCCTCTGTTTTCGGTATCGCTGGTAGAAACAGCAACGCAAAACACCAACGTCATTTACTACCCCGTCGGTTTCGGGTTGGGAGGTATTTCCGTTGGGGGAAGTTATTTCAGCCAGAAATTTGCTATCAACGGCTCAAATTCGCTTGTAACCACTGAAAACAGCGTCTTGAACGCTCCGACCATCGTATTTGCCGGCTCCGATAATTTGGGTTGTCAAATCGCGGTAAACGGCAACGCGCCAGCAACGGACTTGACGGCGCAATCAATTACACAGATCTCAATCGGGCGACGTAGTGATGGCTTTTGGCCGTTTTTTGGATCGATTTCCGAAGTAATATTTTTCCCGTCTTTACTCTCCACCACCGCCCGCAAAACCCTTGAGCGTAACCAAGGTATTTATTTTGATATATCAATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b5101f89868c2c164a18050137f0527df8d4af02a9a5cc07d4a676df174ad68d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8705
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of vB_AphaS-CL131 cyanophage infecting filamentous diazotrophic cyanobacteria Aphanizomenon flos-aquae Sulcius,S., Simoliunas,E., Alzbutas,G., Meskys,R. and Paskauskas,R. — — GenBank