Protein

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Genbank accession
AOV57527.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MVRSKSTNYTRNKSLFGGVPGTIQIHTTPGIGINNDPNTAKFKDDLPGGFLKCDGSVHNAKDYYLLAQILGVGEECRFKKEKTTLRDPNPEIDDLGSFQLPDLGSKVIIPSGGSGDYTNVFMENKPSTTKVGVECQAVLEGQENRIFVNYTSGSSTNNGIVSWSGYNGSVGGGGAITGFLMRQVTQVDGSGLTVNTWAGSEFGDYGYRNAPGNNPNWWNNPNENITGDFRIRRNNSGNTDRLTDGVGCVMNVTIEPNQKPNGEFNRSKVRLNAYVNGQRGSGYKVDDECSVVEWDELAGTGNRIFKVTSVSAPLGAEGFQTGTTDQWFYNNAGSDFWDDTGSRYDYWEDDNDYVEENFQMQGGSGAGAVFKIRMQGDDGGRTKWKILAIINPGEGYVTGDKLSWNFNTPWRIENGHNGNISLEDDNGDGVVRVDGTSAVSLQAGMEVEGSSSDISFNGNLRYNMIRETEGYILTIDEFQAHSHRADVSVLNYTGNYDTDGQGMTGSQQNSFSANSDGFNGMDETTLNIPNGEPNHLHRLQRPTAYNQNFVYNYSPFNIPTDNMQSYIDVDIERVDVLNQVVTPFIMVHYIIKF
Physico‐chemical
properties
protein length:593 AA
molecular weight: 65239,61790 Da
isoelectric point:4,68481
aromaticity:0,10287
hydropathy:-0,63103

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AOV57527.1
1 593
Domain Start End Length (AA) Confidence
N-terminal 1 102 102 0,4934
Central domain 103 301 200 0,6647
C-terminal 302 593 291 0,4993
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-102
Central
103-301
C-terminal
302-593

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM1
[NCBI] 		754037 Uroviricota > Caudoviricetes > Pantevenvirales > Anaposvirus > Anaposvirus socalone
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOV57527.1 [NCBI]
Genbank nucleotide accession
KU686193 [NCBI]
CDS location
range 32383 -> 34164
strand +
CDS
ATGGTAAGGTCTAAATCTACTAACTATACAAGAAATAAGTCTTTGTTTGGTGGTGTTCCTGGCACTATCCAAATTCATACGACCCCTGGTATCGGTATCAACAATGATCCTAATACGGCAAAATTCAAGGATGATTTGCCTGGTGGATTCTTAAAGTGTGATGGGTCAGTACATAATGCAAAAGATTATTATTTGTTAGCACAGATTCTCGGTGTTGGTGAAGAGTGTAGATTCAAGAAAGAGAAAACTACTTTAAGAGACCCAAATCCAGAGATAGATGATCTTGGTAGTTTTCAGTTGCCCGATCTAGGATCTAAAGTTATTATTCCTAGTGGTGGTAGTGGAGATTATACTAATGTCTTCATGGAAAATAAACCCAGCACAACAAAGGTTGGTGTAGAGTGTCAGGCAGTCCTTGAAGGTCAGGAGAATAGAATCTTTGTCAATTATACTTCTGGTTCTTCTACCAACAATGGTATCGTTAGTTGGAGTGGATACAATGGATCTGTAGGTGGTGGTGGTGCTATTACAGGATTCTTAATGCGTCAAGTAACACAGGTGGATGGTTCTGGATTAACTGTAAATACATGGGCAGGTTCTGAATTTGGTGATTATGGTTATAGAAATGCTCCTGGGAACAATCCCAACTGGTGGAATAATCCCAATGAAAATATCACAGGAGACTTCAGAATCAGGAGAAACAACAGCGGTAATACAGATCGATTAACCGATGGTGTTGGTTGTGTCATGAATGTCACCATCGAACCAAACCAAAAACCAAATGGTGAATTCAATAGGTCGAAAGTTAGACTTAATGCATATGTCAATGGTCAGAGAGGATCTGGATATAAAGTAGATGACGAGTGTTCAGTTGTCGAGTGGGATGAACTGGCAGGAACAGGTAATAGAATTTTTAAAGTTACATCAGTTTCTGCACCTCTTGGAGCTGAAGGATTTCAAACAGGAACTACTGATCAGTGGTTCTATAATAATGCTGGTTCTGACTTTTGGGACGATACTGGAAGTCGGTATGATTATTGGGAAGATGATAATGATTATGTAGAAGAAAATTTCCAGATGCAAGGTGGGTCTGGCGCTGGTGCAGTATTCAAGATTCGTATGCAAGGCGATGACGGTGGTAGAACAAAGTGGAAGATTCTTGCCATCATCAACCCTGGTGAAGGATATGTTACTGGTGATAAACTATCCTGGAACTTCAATACACCATGGCGCATTGAAAATGGACACAATGGAAATATCTCACTCGAAGATGATAATGGTGATGGCGTAGTCAGAGTAGATGGCACTAGTGCCGTTTCATTGCAAGCTGGTATGGAAGTGGAAGGATCATCTTCAGACATTAGCTTCAATGGAAACTTGAGATATAACATGATCAGAGAGACTGAAGGTTACATCTTGACCATTGATGAGTTTCAGGCACACTCTCACCGTGCTGATGTCAGTGTATTGAATTATACTGGAAACTATGACACTGATGGTCAGGGTATGACAGGAAGTCAGCAGAATTCTTTTTCTGCCAACTCTGATGGATTTAATGGCATGGATGAAACAACCCTCAATATTCCTAATGGAGAACCAAACCACTTACATAGACTTCAGAGACCAACGGCGTACAACCAAAACTTTGTTTATAACTATTCCCCATTTAATATTCCTACTGACAACATGCAATCATACATTGACGTTGATATTGAAAGAGTTGATGTATTGAACCAGGTTGTTACTCCATTCATTATGGTTCATTACATCATCAAGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
05ecf6c016613fe579df5b97cba38f1ef7cd502b1251e752673193f1c015637d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3941
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50