Protein
View in Explore- Genbank accession
- AIW03698.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TSPTSPTSPTSPTSPTSP
- Protein sequence
-
MPTITTQDKFFGSNVVTEFIDSVGTSEITYTFTGEPREEIRLQNLSTATVILTVAGQEVTAEAFSSIKVSDLSVMDFKVKSLMGGASFRLTASYVTEDEEDEIKLEKEISNVRNKQNNKDVVVDYKVEKGVLKNAASLIQKAIDECTPVGLWVVIPKGDYYLEKSLIAKAGLKMIIHKDAKLLRYHNDCMVLNGVPGDMVGQSDIWIDGGQWDCRGHLIADDGSAFAMGYAKNITLRNLKIYNVNFSHGMEICAIDTADIEFCEGYGFIDTGGTRTTAEFIQIERGTPTGFPYFGPGDGTPCKNIYVKRAKIGPSANAPSFNVGVGSHDNIINTGAIGVHIIDCDFSQAVKTGMQLRGLRNTVVERVIAYGEKGVEIGHDNATETNVLIRDSDIKGTLTSGITLDGVTKLVIEHTKIDGYTNGIYGLRSKDIDIDKKCDISGQTSDAVAIITNSSNVSVARCIIRKAGRHAFNIYDNASHYRIKENTVIDVATNVFNLAGSNTKQMHIRENTVLDTTLTNIVNASAGVDKLFFKDNVYPASIATPIVSSATNSTVLAADNITF
- Physico‐chemical
properties -
protein length: 563 AA molecular weight: 61200,58830 Da isoelectric point: 5,41968 aromaticity: 0,07282 hydropathy: -0,11634
Domains
Domains [InterPro]
DC_1325
ATT
1–130
ATT
1–130
Coil
Unmapped
95–115
Unmapped
95–115
IPR012334
STR
134–385
STR
134–385
IPR006626
Unmapped
231–254
Unmapped
231–254
IPR006626
Unmapped
384–406
Unmapped
384–406
1
563
Architecture
ATT 1-130 | STR 131-550 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
563
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 132 | 132 | 0,8656 |
| Central domain | 133 | 552 | 421 | 0,9941 |
| C-terminal | 553 | 563 | 10 | 0,1789 |
Note: Constraints were applied during segmentation.
Fixed 12 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 12 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-132
1-132
Central
133-552
133-552
C-terminal
553-563
553-563
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage Pookie [NCBI] |
1540093 | Uroviricota > Caudoviricetes > Pagevirus > |
| Host |
Bacillus megaterium [NCBI] |
1404 | cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales |
Coding sequence (CDS)
Coding sequence (CDS)
No CDS data available.
Genome Context
Genome Context
Tertiary structure
PDB ID
4f5e460577cce807eae3aea21d6cae62c48cc0cec8ba80ce84c7931eb0e4dc79
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50