Protein

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Genbank accession
NP_536667.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MSQTAIPLQFEKYLQNQISVGKAPDMNEMIFAYIPNLDPSQPIDRNQGLPAVSTWVHQQDIDQVGKLGDNALVYSVVIPGSVAAFTFNAIYLRDKNVPNSCGMVVHKATETKEAGMASTKNLMQQYTGAAQVAGITVDAQTWQIDYQARLLGIEEDMRLANLDNYGHTAFIQGFDVTQQADPAKYKVAPGVVYVGGLRAELKNESIQTISAKPTGLYIDVVRTGTVLSKWQNIVTVRASATPLTDYVDQNQQQHYVARLAGINANGSITDWRVKTDNAAQEWSPFINYGIGHEVVSSGLRYIARAASGPDNGGAKDPHSDDELFWDLSLPTSFSTTKNFTPNESWVKIAVVDGELASDPFGGGDAVLISVFGASDYGSLYRFYADIIFSERAGQSSVIIIPKSLGLDNPEFYSKQISSRKFELWMHKTDHYANPLTVTRQSDSFNRTTEVGILERTSITPTDLTIVPYDTGYQFASIPIGMEVAFDTPPPTNDPRFRFVKLTHNDAYNTGLLTSQTLAGSAPELVSTAVISAAQSPINGQTIYLKNTMGVYAVPAATQGIIAQNIPQPPRYRIDSISPGVSLQTGPSISGFIITSAASESQITGGLKPRSFGEVLYKRIY
Physico‐chemical
properties
protein length:620 AA
molecular weight: 67561,12120 Da
isoelectric point:5,31049
aromaticity:0,09355
hydropathy:-0,19919

Domains

Domains [InterPro]
DC_1466
ATT
1–198
DC_1466
IPR022225
ATT
4–153
IPR022225
NP_536667.1
1 620
Architecture
ATT
ATT 1-198 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteriophage K139
[NCBI] 		2905721 Uroviricota > Caudoviricetes > Peduoviridae > Longwoodvirus K139 >
Host Vibrio cholerae O139
[NCBI] 		45888 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio > Vibrio cholerae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_536667.1 [NCBI]
Genbank nucleotide accession
NC_003313.1 [NCBI]
CDS location
range 27561 -> 29423
strand +
CDS
ATGAGCCAGACGGCCATTCCACTGCAGTTTGAAAAGTACCTGCAAAATCAAATCAGTGTCGGCAAAGCGCCAGACATGAACGAGATGATTTTTGCCTACATCCCAAACCTTGACCCAAGCCAGCCGATTGACCGTAACCAAGGGCTACCAGCCGTATCAACATGGGTGCATCAGCAAGATATCGATCAGGTAGGAAAGCTCGGCGACAACGCGCTGGTCTATTCGGTTGTGATCCCCGGTTCAGTGGCCGCGTTTACATTCAACGCCATCTATCTGCGTGATAAAAACGTGCCAAACTCCTGCGGCATGGTGGTACACAAAGCCACTGAAACCAAAGAAGCGGGCATGGCGAGCACCAAAAACCTAATGCAGCAATACACAGGTGCAGCGCAAGTAGCAGGCATTACTGTAGATGCGCAAACGTGGCAAATCGACTACCAAGCCCGCTTGTTGGGTATTGAAGAGGATATGCGCCTCGCGAACTTGGATAACTACGGGCACACCGCATTCATTCAAGGCTTTGATGTCACCCAGCAAGCAGACCCAGCCAAATACAAAGTAGCACCGGGTGTGGTGTACGTGGGCGGCTTGCGTGCCGAGCTAAAAAACGAGTCCATTCAAACCATCAGCGCCAAGCCAACGGGTTTGTATATCGATGTTGTTCGCACGGGTACCGTGCTATCAAAGTGGCAGAACATCGTCACCGTTCGCGCCTCCGCAACACCGCTCACCGACTACGTTGACCAAAACCAGCAGCAACACTACGTTGCAAGGCTGGCGGGGATTAATGCGAATGGGAGTATCACAGATTGGCGTGTAAAAACAGACAACGCTGCTCAAGAGTGGTCGCCATTTATTAACTACGGCATCGGCCACGAAGTTGTTAGCAGTGGCTTGCGCTATATCGCCCGCGCTGCGTCAGGGCCAGATAATGGTGGGGCAAAAGACCCTCATTCAGATGATGAATTATTTTGGGACTTGTCACTCCCGACATCATTTTCTACAACGAAAAATTTCACACCAAACGAGTCGTGGGTAAAAATTGCAGTTGTGGATGGCGAATTAGCTTCAGACCCTTTCGGCGGCGGTGATGCAGTGCTTATTTCTGTTTTCGGTGCGTCCGACTATGGAAGCTTATATCGCTTCTATGCAGATATAATCTTTTCAGAGCGAGCAGGACAATCGAGCGTTATAATCATTCCTAAATCACTTGGTCTGGACAACCCTGAGTTTTATTCAAAGCAAATATCTTCAAGAAAATTCGAGCTTTGGATGCATAAAACTGACCATTACGCTAACCCGTTGACAGTAACTAGGCAGTCTGATTCGTTTAATCGAACAACGGAGGTTGGTATTTTAGAGCGGACTAGTATTACTCCAACAGACTTAACAATAGTACCCTACGACACGGGCTACCAATTCGCATCTATTCCAATCGGAATGGAAGTGGCCTTCGATACGCCGCCGCCGACAAATGACCCGCGCTTTCGCTTTGTAAAACTGACGCACAATGATGCTTACAACACAGGTTTGCTAACATCACAAACGCTTGCGGGTAGTGCGCCAGAGCTAGTTTCGACAGCTGTAATTTCAGCAGCGCAAAGCCCTATCAATGGGCAGACTATTTATCTTAAGAACACAATGGGGGTATATGCGGTACCTGCCGCAACGCAAGGAATAATTGCACAAAACATACCCCAGCCACCCAGGTACAGGATAGACAGTATAAGTCCTGGGGTTAGCTTGCAAACTGGCCCAAGTATCTCTGGATTCATCATAACTAGTGCAGCTTCCGAATCTCAGATTACTGGTGGTTTAAAACCACGCAGTTTTGGTGAAGTCTTATACAAGAGGATTTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
325e1dc428f663949439157934c50db8b9fc5b64a5e102a785af33fb8324c228
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6781
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of the major control region of Vibrio cholerae bacteriophage K139: immunity, exclusion, and integration Nesper,J., Blass,J., Fountoulakis,M. and Reidl,J. 1999 10217785 GenBank
Characterization of Vibrio cholerae bacteriophage K139 and use of a novel mini-transposon to identify a phage-encoded virulence factor Reidl,J. and Mekalanos,J.J. 1995 8817491 GenBank