Protein

View in Explore
Genbank accession
XLQ31027.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MPIYLANKEVLSSGLNDDELAAAIATKAPLQSPALIGVPTAPTPATANNSQQLATTAFVKAVLAENDFATEEALALKSNIDSPAFTGTPTAPTAAANTDNNQLATTKFVWDMWRLIQDGAGEAFDTFKEIQDWIDEHGQETADIIAQLAGKADIDTLTGVIAESDLPEALRYTSAVVANANNIKANGFYATNASTTGLPYDYGQVGTLTVSSGPNNAVTQTFITRNFPNVYVRTLTSTNVWSAWYQLAVPQDFETDTTDGRAMILGAFGLGKSAILLTAADSIDTMFSKTGFYYWTASTPAGAAAANAIMINIRMAGAGGVQIVYYMNGNFAYRIQATNGVLGGWRTSLTSSDVQLNPADDTATRVLKVGGFGLGGDALPITDDLNNNRPTGHYYATGASNRPNNLDGHLWHVRKDTDNQTQLYNVGVGTDAAATYTRKKVAGTWGNWKKLGGDVSSPDVAPTVKQPAGFADISGTKLIALTAEEVRLFAQVMKGGASGRDFLFNGNFRRWLRNSQQSASGYGSHDRWQNNYRNSTMSCQRYDFTPGQTEVPGFPKHYVRTNWVRSSVTDDVFAVKSQVLWDVNRLGGKKLTLTFWARASYARPLPIEFYNYYGSGGSPTANTSLLVGSPNITTAWQRFSIVFDMTSLSGKTIGTDGQDRTELLLWFDGGTNFASRNGNMARMNSGWIDLAMISLVEGDASGEILPVTWYDPEIEDRRMDVYCQVMTLNMRGYLPGNDWALSSGPQWTAMRRAPDIIDLGTGNFYGAKSFNFYNVVPWGARAELIAAGSGDNYAIDKRYILFAE
Physico‐chemical
properties
protein length:804 AA
molecular weight: 87165,22960 Da
isoelectric point:5,16265
aromaticity:0,10697
hydropathy:-0,24938

Domains

Domains [InterPro]
DC_0711
STR
2–74
DC_0711 cd19958 DC_0568
DC_1589
STR
63–339
DC_1589 cd19958 IPR008979
G3DSA:2.60.120.260
STR
567–673
G3DSA:2.60.120.260
XLQ31027.1
1 804
Architecture
STR
STR 2-798 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Agrobacterium phage JP1
[NCBI] 		3386826 Viruses >
Host Agrobacterium tumefaciens
[NCBI] 		358 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLQ31027.1 [NCBI]
Genbank nucleotide accession
PQ741606.1 [NCBI]
CDS location
range 11635 -> 14049
strand +
CDS
ATGCCCATATACCTCGCGAACAAGGAAGTCCTCTCTTCCGGTCTGAACGATGACGAATTGGCGGCGGCTATCGCCACTAAAGCACCGCTGCAATCCCCGGCGCTTATCGGCGTTCCTACAGCCCCGACACCCGCGACGGCTAACAACAGCCAGCAGCTTGCCACCACGGCTTTCGTTAAAGCGGTTCTAGCGGAAAACGATTTCGCTACCGAGGAAGCCCTTGCCCTCAAATCGAATATCGACAGCCCCGCGTTTACCGGAACCCCGACCGCCCCGACCGCTGCGGCCAATACAGACAACAACCAACTCGCGACAACCAAGTTTGTTTGGGACATGTGGCGTCTTATTCAAGACGGTGCCGGGGAAGCCTTCGACACGTTCAAGGAAATCCAAGACTGGATCGATGAACACGGGCAAGAGACTGCGGACATCATTGCGCAGCTTGCGGGCAAAGCAGACATCGACACCCTGACAGGGGTTATTGCGGAGAGCGATCTGCCTGAAGCGCTGCGCTACACGTCCGCTGTTGTGGCTAACGCTAACAACATAAAGGCCAATGGTTTTTACGCGACCAACGCATCCACGACCGGCCTCCCCTATGACTACGGACAGGTAGGTACGCTGACAGTTTCTTCCGGCCCGAACAACGCAGTTACACAGACATTCATCACACGTAACTTTCCAAACGTGTATGTTCGTACCCTGACAAGCACGAACGTTTGGAGCGCGTGGTATCAGCTTGCCGTTCCGCAGGACTTCGAAACGGACACCACCGATGGCCGGGCAATGATCCTCGGTGCCTTCGGTCTCGGTAAATCCGCGATCCTGCTTACTGCGGCGGATAGCATCGATACCATGTTCAGTAAAACTGGTTTCTATTACTGGACAGCGTCCACTCCGGCAGGTGCGGCGGCGGCTAACGCGATCATGATAAACATCCGCATGGCGGGTGCGGGTGGTGTGCAGATCGTCTACTACATGAACGGCAACTTCGCGTACCGTATTCAGGCGACAAACGGCGTACTTGGAGGCTGGCGTACTTCACTCACCAGTTCCGATGTCCAGCTTAATCCGGCAGACGATACGGCAACTCGTGTTTTGAAGGTCGGTGGTTTTGGCCTCGGCGGGGACGCACTACCAATTACGGACGATCTGAACAACAATCGCCCAACGGGTCATTATTACGCGACAGGGGCGTCCAACAGGCCCAATAATCTTGACGGCCATCTTTGGCACGTTCGAAAAGACACGGATAACCAAACTCAGCTATACAACGTAGGTGTAGGCACCGACGCAGCCGCTACGTATACACGTAAGAAAGTTGCGGGTACATGGGGCAACTGGAAGAAGCTCGGTGGGGACGTGTCTTCCCCGGATGTCGCGCCTACTGTTAAACAGCCTGCCGGATTTGCGGACATCAGTGGAACTAAGCTTATAGCTTTGACTGCGGAAGAGGTCCGTCTTTTTGCCCAAGTAATGAAGGGGGGCGCATCTGGTCGAGATTTCCTGTTTAACGGGAATTTCCGTCGATGGTTGAGAAATTCCCAGCAGAGCGCGTCGGGATATGGATCGCATGATCGCTGGCAAAATAACTATCGCAACTCCACAATGAGTTGCCAGCGGTATGACTTCACACCCGGTCAAACAGAAGTACCCGGATTTCCTAAGCATTACGTTCGAACGAATTGGGTTCGTTCTTCTGTAACTGACGATGTGTTCGCGGTTAAGTCGCAGGTGCTGTGGGACGTTAATCGGCTCGGTGGCAAAAAGCTAACTCTTACTTTTTGGGCAAGGGCTAGTTACGCGCGTCCGCTGCCTATAGAGTTTTATAATTACTACGGATCGGGAGGTTCCCCGACAGCAAACACTTCCTTGCTTGTAGGGTCCCCTAACATCACAACGGCATGGCAGCGGTTTTCAATAGTATTCGATATGACGTCTCTATCGGGGAAAACCATCGGCACCGATGGGCAGGACCGAACCGAATTACTACTCTGGTTCGATGGAGGCACGAACTTCGCATCGAGAAATGGGAACATGGCCAGAATGAATTCTGGTTGGATCGATCTAGCCATGATATCACTCGTAGAAGGGGATGCTTCGGGAGAGATACTGCCGGTTACTTGGTATGATCCAGAAATAGAAGACCGGCGCATGGACGTGTATTGCCAAGTAATGACGCTCAACATGCGTGGGTATCTACCGGGTAACGATTGGGCATTGTCGTCCGGGCCTCAGTGGACTGCTATGCGCCGAGCCCCGGATATCATCGATTTGGGCACTGGTAACTTTTACGGGGCCAAGTCGTTCAATTTCTACAACGTGGTTCCATGGGGCGCACGCGCAGAACTTATAGCCGCAGGTTCCGGTGACAACTATGCAATCGACAAACGATATATACTTTTTGCGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
df1a8f5ad95414e0d984791a7cede734d0be94eea4e02af0cbd5efcf73db2428
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7710
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50