Protein

View in Explore

Genbank accession

GENB_60426d595a03 [GenBank]

Protein name

receptor binding protein

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,90

Protein sequence

MAKPKDPIYVWAAADVNLPGTGRPNKSKPIDDLLAKGYDKGQKPAAEEFNYILNMSSAWVAWIVNEKFPELEAEIARLLAELEARINQQLDVIRQDIAKVKQDLADLKRYVDQQVALLKQEIQGVRNDLNKLRQDFDAAIAQVNGRIDDLEPRLVPIGAVIPWPGATPPNGWLECNGQVFNTGTNPKLYGVLGRNTVPDYRGLFLRGWAHGSGANDPDAGRALGSVQGDAIRNITGYFPADIGQSGWIGRYVGGAFRDDGGLTSGDQGSRSNEVRKYSFDASREVPVAAENRPKNIAVMYIIKTDQAQSSGGNSPTAIVVSPDTITNRVGYTVKATASVLPSSIAGQYPVSWATQNASVATVDGSGNIRLVGPGETNIIASISTGMNVAIRVTSYSVLTSISIADPGQIQVGDSKMLVVTKNPGSANEPLQYLSNNSGVATVNDAGYVTGVSAGSATITVRGTLSGVSSTRAVTIIPEVVAQTIEDVRLGVEQQTPHNGDNYTTPVRAPAGCAITGMMSIGLGLDYGYYKAIQKKVNGVWVTVEG

Physico‐chemical properties

protein length:	545 AA
molecular weight:	57973,55790 Da
isoelectric point:	5,71086
aromaticity:	0,06606
hydropathy:	-0,20367

Domains

Domains [InterPro]

DC_0413
STR
1–529

DC_0413

SSF58113
STR
41–156

SSF58113 IPR011083 IPR003343 G3DSA:2.60.40.1080

G3DSA:1.20.58.130
Unmapped
88–154

G3DSA:1.20.58.130 SSF88874 G3DSA:2.60.40.1080 IPR003343

Coil
Unmapped
90–110

Coil Coil IPR051934 IPR003343 IPR003343

IPR037053
ATT
155–206

IPR037053 IPR008964 IPR008964

GENB_60426d595a03

1 545

Architecture

STR

ATT

STR

STR 1-154 | ATT 155-206 | STR 207-529 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0413	STR	DC_0413	1	529	Novel HMM	DC_0413	Central	Low	Positional only	85 proteins / 85 hits
SSF58113	STR	SSF58113	41	156	Merged direct domain	SSF58113	Central	Low	Positional only	3 proteins / 3 hits
G3DSA:1.20.58.130	Unmapped	-	88	154	Gene3D	None	-	-	-	-
Coil	Unmapped	-	90	110	Coils	Coil	-	-	-	-
Coil	Unmapped	-	115	142	Coils	Coil	-	-	-	-
IPR051934	Unmapped	-	149	239	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
SSF88874	STR	SSF88874	154	303	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	155	206	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR011083	ATT	DC_0235	158	204	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
IPR003343	STR	DC_0008	314	392	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
G3DSA:2.60.40.1080	STR	G3DSA:2.60.40.1080	314	395	Merged direct domain	G3DSA:2.60.40.1080	Central	Low	Positional only	18 proteins / 18 hits
IPR003343	STR	DC_0008	316	380	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR008964	RBD	IPR008964	316	392	Merged direct domain	Invasin/intimin cell-adhesion fragments	C-terminal	Low	Positional only	2 proteins / 2 hits
G3DSA:2.60.40.1080	STR	G3DSA:2.60.40.1080	396	476	Merged direct domain	G3DSA:2.60.40.1080	Central	Low	Positional only	18 proteins / 18 hits
IPR003343	STR	DC_0008	397	474	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR003343	STR	DC_0008	400	460	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR008964	RBD	IPR008964	413	461	Merged direct domain	Invasin/intimin cell-adhesion fragments	C-terminal	Low	Positional only	2 proteins / 2 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Enterobacter phage ENT3 [NCBI]	3420855	Viruses >
Host	No host information

Coding sequence (CDS)

No CDS data available.

Genome Context

Tertiary structure

PDB ID

a047acdcb9308c05b3203ea8123c08d416e173db72231da8c46c1b704e884f1b

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,8338

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence