Protein

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Genbank accession
QZI86730.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,67
Protein sequence
MNENFDPSLIPLEAYEEFDSRNANWGDMPTDSIEDAQVSEPKPMLDFDRLAKDLAPATIPLADIPVKADPATLNPQQLEAFEDMKAGKNVFLTGEGGCVDADTEFLTPKGWVKISNYKDGDLVAQWSESGEISFIKPLGYTKVPAKTLTEIETKTVKMSLSLGHRTPYLTSRGNLSVKSFGDALKMSKLDIPRGFNFKLGDGTGISKELIRVLIMQSADGSDISTSLGFKVAVNVKKERKKERARHILSAAGIPFKEWKSSGGYVRFAYYPPLEIATKGLAMLWDCTPEEISVAASEIPLWDGSVNKSSCGIERVRFTGSKSDCDVVQFILSSHTGCYHNLRKDCRDKYKSDVYDVSSSSRDVSHIELNNQSGCGSQTKIVDTVDGFQYCFTTETTFWLARKDGFIFPTGNTGKSYVTECFIQWCLGMKLKVVVSAPTGVAAININGVTNHRVFGLPIDYIEHPSYHH
Physico‐chemical
properties
protein length:468 AA
molecular weight: 51703,07440 Da
isoelectric point:5,80976
aromaticity:0,09402
hydropathy:-0,30214

Domains

Domains [InterPro]
IPR036844
STR
96–171
IPR036844 IPR027417
IPR036844
STR
96–175
IPR036844 IPR027417
IPR010285
Unmapped
403–462
IPR010285
QZI86730.1
1 468
Architecture
STR
STR
STR 96-175 | STR 385-467 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI86730.1
1 468
Domain Start End Length (AA) Confidence
N-terminal 1 70 70 0,9626
Central domain 71 269 200 0,4891
C-terminal 270 468 198 0,5674
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-70
Central
71-269
C-terminal
270-468

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 82E32.1
[NCBI] 		2859294 No lineage information
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI86730.1 [NCBI]
Genbank nucleotide accession
MW865353 [NCBI]
CDS location
range 1 -> 1404
strand -
CDS
ATGAATGAAAACTTTGACCCAAGCCTAATACCTTTAGAGGCATACGAGGAATTTGACAGCCGCAATGCTAACTGGGGTGACATGCCAACAGATAGCATTGAAGATGCTCAAGTGTCAGAACCTAAGCCAATGCTTGACTTCGATCGACTAGCAAAGGATCTAGCACCAGCAACCATCCCACTGGCTGACATCCCGGTCAAGGCAGACCCGGCGACTTTAAATCCTCAGCAACTGGAAGCATTCGAGGATATGAAGGCTGGCAAGAATGTATTCCTTACTGGTGAGGGCGGGTGTGTCGATGCTGACACTGAATTTTTAACCCCTAAAGGGTGGGTTAAAATCTCAAACTACAAGGACGGAGATCTTGTGGCGCAATGGAGTGAGAGTGGTGAGATTTCATTTATCAAACCACTTGGGTATACAAAAGTTCCAGCAAAAACATTAACTGAAATCGAAACAAAGACAGTAAAGATGAGTCTTTCGCTAGGTCATAGGACTCCATATCTTACAAGTAGGGGTAACCTTTCAGTGAAGTCATTCGGTGATGCTTTAAAAATGTCAAAGCTTGATATCCCTAGAGGGTTTAACTTTAAGCTAGGCGATGGCACTGGCATTAGCAAGGAGTTGATACGCGTCCTTATCATGCAATCTGCGGATGGCAGTGATATCTCAACAAGCCTCGGATTTAAGGTTGCTGTAAATGTAAAGAAAGAAAGAAAAAAAGAAAGGGCTAGACACATCCTGTCTGCCGCTGGGATTCCATTTAAGGAATGGAAGTCAAGTGGCGGTTACGTAAGATTCGCATACTACCCACCACTTGAGATTGCAACCAAGGGATTAGCAATGCTATGGGACTGCACCCCTGAAGAGATTTCAGTTGCGGCCAGTGAGATTCCATTGTGGGATGGTAGTGTCAACAAGTCTTCCTGCGGCATTGAAAGGGTTAGATTTACTGGATCAAAGTCAGATTGCGATGTGGTTCAGTTTATCCTATCGTCACATACGGGCTGTTATCACAACTTAAGAAAAGACTGTAGAGATAAGTATAAGTCTGATGTGTATGACGTATCATCTTCATCAAGAGACGTGTCGCATATAGAGCTTAATAACCAAAGCGGGTGCGGCAGCCAAACCAAAATTGTTGACACTGTTGATGGGTTTCAATATTGCTTTACTACAGAAACTACATTCTGGCTTGCTAGAAAGGATGGGTTTATATTCCCTACAGGGAATACGGGTAAATCTTACGTTACTGAGTGCTTTATCCAGTGGTGCCTTGGCATGAAACTAAAAGTGGTCGTCAGCGCTCCAACTGGTGTTGCTGCAATCAATATCAATGGCGTTACTAACCACCGAGTGTTTGGCCTTCCTATTGATTACATCGAGCACCCTTCATACCACCAC

Genome Context

Genome Context

Tertiary structure

PDB ID
78e21f9b34be511fb07d219f6b825f35504b7fa8fbaabab7fa94c4425f841026
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7925
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rapid evolution of virus immunity in the wild Piel,D., Bruto,M., Labreuche,Y., Blanquart,F., Chenivesse,S., Lepanse,S., James,A., Garcia Cruz,R., Dubert,J., Petton,B., Lieberman,E., Wegner,M.K., Hussain,F.A., Kauffman,K.K., Polz,M.F., Gandon,S., Bikard,D. and Le Roux,F. 2024-02-09 — GenBank