Protein

View in Explore
Genbank accession
XSB41266.1 [GenBank]
Protein name
side tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MLYNTGTIAINGNSATGTGTNWTAPASQVRAGQTIIVMSNPVQLFQISSVNSATSMTVTPAASPALSGQKYGILVSDNISVDGLALAMSQLIKEYDENIGAWETFATTSANQSITVTINGTAVTIPGIGKLAQKGSNGAVTVADGGTGATNAADARTNLSLGNSATRDVGTETGTVAAGDDPRLNTVNGKTSGVVKGDFFTLDNRYGHTTQLLTYNPGTVGTHFGGMSMKRPNSQGWILSQYTTTDYEVQSVTIGIDAPGANVNWIFNRNGQATGTWVNNSDSRIKKDIKPIPDPLVAMKKIRGCSWTRLDSGVTGFGFIAQEVQEVFPEAVHDFGQSMTMEDGKEVENVLSVDTSGVSAALHHEAILALMVEIEELKTEMKSLTGVGR
Physico‐chemical
properties
protein length:389 AA
molecular weight: 40834,16810 Da
isoelectric point:5,09149
aromaticity:0,05913
hydropathy:-0,14936

Domains

Domains [InterPro]
DC_0709
STR
1–322
DC_0709
IPR030392
CHP
281–381
IPR030392
IPR030392
CHP
281–333
IPR030392
DC_0594
RBD
296–388
DC_0594
XSB41266.1
1 389
Architecture
STR
RBD
STR 1-322 | RBD 323-388 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage mEpX2
[NCBI] 		1147154 Uroviricota > Caudoviricetes > Hendrixvirinae > Shamshuipovirus mEpX2 >
Host Escherichia coli str. K-12 substr. MG1655
[NCBI] 		511145 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSB41266.1 [NCBI]
Genbank nucleotide accession
PV340544.1 [NCBI]
CDS location
range 37259 -> 38428
strand +
CDS
ATGCTTTATAACACTGGAACCATCGCCATTAACGGAAACAGCGCCACCGGCACGGGCACGAACTGGACGGCACCCGCCAGCCAGGTTCGCGCTGGCCAGACGATTATCGTGATGTCTAACCCGGTGCAGCTGTTCCAGATTTCATCCGTGAACAGCGCCACGTCAATGACGGTTACGCCAGCTGCATCACCGGCGCTGAGCGGCCAGAAGTACGGCATTCTGGTATCAGACAATATCTCGGTTGATGGGCTGGCGCTGGCCATGTCGCAGCTTATCAAAGAGTACGACGAGAATATTGGCGCGTGGGAGACGTTCGCCACCACCTCAGCAAACCAAAGCATCACAGTTACCATCAACGGCACCGCCGTAACCATCCCAGGCATCGGTAAACTTGCGCAGAAAGGGAGCAACGGTGCGGTTACTGTCGCAGACGGCGGAACCGGCGCAACGAATGCCGCAGACGCTCGCACAAACCTCAGTTTAGGAAACAGCGCTACGAGGGACGTTGGAACTGAGACAGGAACGGTGGCCGCCGGTGATGACCCCCGACTTAACACAGTGAACGGCAAGACGTCTGGTGTCGTAAAGGGTGATTTCTTTACCCTGGATAATAGGTACGGCCATACAACCCAGTTATTGACATACAACCCTGGAACAGTGGGGACGCATTTTGGCGGTATGTCTATGAAGCGACCCAATTCACAGGGATGGATTTTGTCGCAATACACTACGACTGATTATGAAGTTCAGTCAGTGACGATCGGCATCGATGCACCAGGCGCAAACGTTAACTGGATATTCAACCGCAACGGACAGGCAACCGGAACCTGGGTAAATAACAGTGACAGCAGGATTAAGAAAGACATCAAACCAATCCCGGATCCACTTGTTGCCATGAAGAAAATCAGAGGCTGTTCGTGGACACGTCTTGACTCAGGTGTAACCGGCTTTGGTTTTATAGCGCAGGAGGTTCAGGAGGTATTCCCGGAGGCTGTTCATGATTTTGGACAGTCCATGACTATGGAAGATGGAAAAGAAGTTGAAAACGTCCTGTCGGTCGATACCAGTGGAGTATCAGCTGCACTCCATCATGAGGCGATACTGGCATTGATGGTGGAAATTGAAGAGCTAAAAACTGAGATGAAATCCCTGACAGGAGTGGGGCGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9da6013d895c34e6db8222dd9db50b1861a285be2b4d835082688ce67b0c2450
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7936
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
E. coli prophages encode an arsenal of defense systems to protect against temperate phages Brenes,L.R. and Laub,M.T. 2025 — GenBank