Protein

View in Explore
Genbank accession
UAW58999.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAGYTRQSAASIINGENITAPPLNAEFNQLESSFNDTTGHAHDGTTGNGPKIDLTTSITGFLPAEHGGFGGKNNYVATTNPGVGDDTNDGYAVGSVWYNVPDDRYWVCVYAAAGSAVWLENRFIDTNGDIAPFATNTVDLGATLKRFKDLFLSGNADIDGSLNVATTAYVGGTLTVAGNTLINGDITLGNSATDDINVTARFKDDLVPGTDDTYDLGSSTLQWRNIWIDGTANIDTLDVHENATVTGTLGVTGDATFANLDATGTTTITSVDLNSGAIDNATIGATTPAAATVTTLTSTGLATLASVDVNGGNVDNTVIGGTTPAAGTFTNLTSSGTSTHATVDINGGNIDATVIGASSAAAGSFTSLTTSGQATLATVDINGGNIDGAAIGSTTTSSGAFTTLSASGGITGTLTGNVTGNVTGDVTGDVTGDLTGNVTAATGSSSFNNVTINGSLNMNAGTSATITNLTAPVNTLDAATKGYVDTSIANLVDSAPGTLDTLNELAAALGDDPNFSTTITNQIATKLSLNGGTMAGDIAMGSNSITGMADPAAAQDAATKNYTDTTFLALSGGTMTGAISMGANKVTSSATPSTGNDLTNKTYVDGILGSATAASASAAAAATSETNAATSETNAANSATAAASSATSAAASLDSFDDRYLGAKATAPTVDNDGDALITGALYFDTTTDTMKVYGSSGWVNAGSSVNGTSDRQTYTATAGQTVFAATYDAGYVDVYLNGVKLLAGTDFTATNGTSITLASGAAVNDIVDIVAYGTFVLADHLTETQSDAKYVEVAGDTMTGSLLGVTQLGVGLTNPSGTVQIKDTSAKIQLTNDTNTGSAEMAFRTTTGSNRGFVAYNFDSDYMSFRTGGSGEVARFDASGNLILNNSPASTSDNIALRIKGGTSGYSNVQFADADDVNVGMIQYNHGSNYMQFTTNDSERMRITSTGDVSISGDLTGLRYFDVYNTASGSTDGAVIRLITEQVGSTATTSADIVKRKNGEFRISNFDTDVAAYMAFNVGSSERMKITSNGNVGLNGVVNPATTLDLGDGWMRGYGMYLEDHDGTKDHQFRLYVYNDNFAISRHTASSGTGAYEDELMKISSGGNVTFNDSGVDADFRVESDTNTHMLFVDAGNDRVGIACSPASTFMVDVDGAANAGGGDYWNLNKWFVVSDGSTTSSSGLGITHTSAGGTYISSIHPYTAWRDINFQGDTFRFLNGGTNNVLEFNNSNFIVNENSLDVDFRVESDTNTHAIFLDAGQTNLIFGRSTTSGFYNGTGSTGMAMEQIGSGNETIMCNNSGNANVYLSKVSGFTNGNYINFAIGGTGTVGSIQGSTSGTTYNTTSDRRLKTDIQPIANGTEKLMAMNPVTHKWKADPHTGETVHGFIAQEMQEIVPEAVSGDPDGEEMMSMDYGRITPVLVAALQDAHKKIEALEERLAELEAK
Physico‐chemical
properties
protein length:1442 AA
molecular weight: 148350,69320 Da
isoelectric point:4,21725
aromaticity:0,07143
hydropathy:-0,16262

Domains

Domains [InterPro]
DC_1283
RBD
153–246
DC_1283 DC_2007 DC_0470 DC_1386 DC_1985
DC_2007
ATT
228–306
DC_2007 DC_2007 DC_2093 IPR030392
IPR030392
CHP
1343–1397
IPR030392 Coil
UAW58999.1
1 1442
Architecture
RBD
ATT
STR
STR
RBD
RBD 153-227 | ATT 228-379 | STR 389-883 | STR 889-1066 | RBD 1205-1442
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UAW58999.1
1 1442
Domain Start End Length (AA) Confidence
N-terminal 1 283 283 0,1182
Central domain 284 519 237 0,6237
C-terminal 520 1442 922 0,6632
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-283
Central
284-519
C-terminal
520-1442

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-212
[NCBI] 		2873405 No lineage information
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UAW58999.1 [NCBI]
Genbank nucleotide accession
MZ892988.1 [NCBI]
CDS location
range 29886 -> 34214
strand -
CDS
ATGGCTGGATATACCCGGCAGTCCGCAGCATCGATTATCAACGGCGAGAACATCACAGCTCCGCCGCTTAACGCTGAATTCAACCAACTTGAAAGCTCGTTTAACGATACGACTGGACACGCCCACGACGGAACTACAGGTAACGGTCCTAAGATTGACCTGACTACATCCATTACAGGCTTCCTTCCTGCCGAGCATGGTGGCTTTGGCGGTAAGAACAACTACGTGGCTACAACCAACCCGGGTGTTGGTGACGACACTAATGATGGATATGCTGTAGGTTCTGTATGGTATAATGTGCCTGATGACCGTTATTGGGTCTGTGTGTATGCTGCAGCCGGCTCAGCCGTATGGCTTGAGAACCGTTTCATTGATACTAATGGTGACATTGCTCCATTTGCCACGAATACTGTAGACCTTGGCGCTACCCTGAAGCGTTTCAAGGACTTGTTCCTATCTGGCAATGCAGACATCGATGGCTCACTAAACGTAGCTACAACCGCATATGTAGGCGGTACACTGACCGTGGCAGGTAACACTTTGATCAACGGTGATATCACCCTTGGTAACTCTGCCACAGACGACATCAACGTCACAGCTCGTTTTAAAGACGATCTTGTGCCCGGCACAGATGACACCTACGACCTTGGCTCTAGCACACTACAGTGGCGTAATATTTGGATCGATGGCACAGCTAACATCGATACACTAGACGTACACGAGAATGCGACAGTCACAGGCACATTGGGTGTTACTGGTGACGCTACATTCGCTAACTTAGACGCTACAGGTACCACTACAATTACGTCTGTGGATCTGAACTCAGGTGCAATTGATAACGCTACTATTGGTGCAACCACACCCGCAGCAGCCACAGTAACCACACTGACTTCTACAGGTTTAGCCACGCTAGCTTCTGTAGACGTTAATGGCGGTAACGTGGACAATACGGTTATTGGCGGGACGACACCTGCCGCAGGTACATTCACTAACCTGACATCGTCTGGCACATCTACTCATGCCACTGTAGATATCAATGGCGGTAACATTGACGCCACAGTTATTGGTGCATCGTCTGCAGCCGCAGGTAGCTTCACCTCTTTGACTACATCAGGACAGGCCACACTGGCGACAGTGGATATCAACGGCGGTAACATCGACGGTGCGGCTATTGGCTCTACCACAACATCGTCAGGCGCATTCACAACCTTGTCTGCCTCTGGTGGTATTACAGGTACACTTACAGGCAACGTAACTGGTAACGTCACAGGCGATGTCACTGGTGATGTAACGGGTGACCTGACAGGTAACGTAACCGCAGCCACTGGATCTTCTAGCTTCAACAACGTGACCATTAACGGTTCGTTGAATATGAATGCTGGTACATCTGCTACGATTACCAACCTAACAGCTCCGGTGAACACATTAGATGCTGCCACAAAAGGCTATGTGGATACGTCTATCGCTAACCTAGTAGATAGCGCACCGGGCACATTGGACACGCTAAACGAACTAGCGGCTGCGCTGGGCGACGATCCTAACTTCTCTACTACGATTACCAACCAGATTGCGACTAAGCTGTCACTGAACGGCGGTACAATGGCTGGTGATATTGCTATGGGTAGTAACTCGATTACTGGCATGGCAGATCCGGCTGCAGCACAAGACGCTGCAACGAAGAACTATACTGATACTACATTCTTGGCGCTGTCTGGTGGAACCATGACTGGCGCTATAAGCATGGGCGCTAACAAGGTTACCAGCTCTGCTACACCAAGCACAGGAAATGACCTCACAAACAAGACGTATGTAGATGGTATCCTTGGATCAGCCACAGCGGCATCTGCCTCGGCTGCAGCGGCGGCGACTTCTGAAACTAACGCTGCTACATCAGAAACCAATGCGGCTAACTCTGCTACAGCGGCGGCAAGTTCAGCCACTTCTGCAGCGGCCTCGCTTGATAGCTTCGATGATCGTTATCTAGGCGCAAAGGCTACTGCACCTACTGTAGACAACGATGGTGATGCGCTAATCACTGGTGCGCTGTACTTCGATACAACTACAGACACCATGAAGGTGTACGGTTCCTCTGGTTGGGTGAACGCAGGTTCATCAGTCAACGGTACATCAGACCGCCAGACTTACACTGCTACTGCAGGTCAGACCGTCTTTGCTGCTACCTATGATGCAGGTTATGTGGATGTCTACCTGAACGGCGTTAAGCTACTAGCAGGAACTGACTTCACAGCTACTAACGGTACAAGCATTACGCTTGCTTCTGGTGCTGCAGTAAACGACATCGTGGACATTGTAGCATATGGTACATTCGTCCTAGCCGATCACCTCACAGAAACGCAGTCTGATGCGAAGTATGTTGAAGTGGCAGGGGATACCATGACGGGTTCTTTGCTTGGGGTCACTCAGCTTGGTGTAGGTCTTACGAACCCTTCTGGCACTGTTCAGATCAAAGACACTTCTGCAAAAATACAGCTTACAAATGATACCAATACTGGTTCTGCAGAGATGGCATTCCGTACAACTACGGGAAGCAACCGTGGTTTTGTAGCCTACAACTTTGACAGCGACTACATGAGTTTCCGTACAGGGGGTTCAGGCGAAGTCGCACGGTTTGATGCGTCAGGCAATCTTATTCTCAACAATTCTCCTGCGTCTACATCAGATAATATTGCCTTGAGAATTAAAGGTGGTACATCAGGTTATTCCAATGTCCAGTTTGCAGATGCAGATGATGTAAATGTTGGGATGATCCAGTATAACCACGGATCAAACTATATGCAGTTCACTACAAACGACAGTGAACGTATGCGGATTACATCGACAGGTGATGTTTCTATCTCTGGCGATTTAACGGGGCTTCGTTACTTTGATGTTTACAACACAGCTTCAGGATCAACAGATGGCGCAGTTATAAGGCTCATAACAGAACAGGTAGGCTCTACGGCGACAACAAGTGCTGATATAGTTAAGCGCAAGAACGGTGAGTTCCGCATATCAAACTTTGATACAGATGTTGCGGCATACATGGCGTTTAATGTCGGTTCATCAGAACGTATGAAAATCACATCAAACGGTAATGTTGGACTTAATGGCGTGGTCAACCCTGCAACCACCCTTGATCTAGGTGATGGTTGGATGCGTGGATACGGTATGTATCTTGAAGACCATGATGGAACGAAAGACCACCAATTCCGTTTATACGTTTACAATGACAACTTTGCTATCTCACGCCATACCGCATCTTCTGGCACAGGAGCCTATGAAGATGAACTGATGAAAATCAGTAGTGGTGGCAATGTTACCTTTAATGACAGTGGTGTAGACGCAGACTTCCGTGTTGAGAGTGACACGAACACCCATATGCTGTTCGTGGATGCGGGTAATGATCGTGTAGGTATTGCTTGTTCCCCTGCTTCAACCTTTATGGTAGACGTGGATGGCGCAGCCAATGCGGGGGGTGGGGATTACTGGAACCTCAATAAATGGTTTGTTGTTTCAGATGGATCTACTACTAGTTCTAGCGGCCTTGGTATTACACATACTTCTGCGGGCGGGACGTATATATCATCTATTCATCCATATACCGCTTGGAGAGACATAAACTTTCAAGGAGACACCTTCCGATTTTTGAATGGTGGTACCAATAATGTCCTTGAGTTCAATAACAGCAACTTTATCGTCAATGAAAACAGCCTGGATGTAGACTTCCGTGTTGAGAGTGACACCAATACTCACGCAATATTTTTAGACGCTGGACAAACCAACCTAATCTTCGGGCGTTCTACTACGTCAGGGTTCTATAACGGCACAGGCTCCACAGGTATGGCGATGGAGCAGATTGGTTCAGGTAATGAAACAATCATGTGTAACAACTCAGGTAATGCAAACGTATACCTGTCAAAAGTATCTGGGTTCACCAACGGAAATTACATCAATTTTGCAATTGGTGGTACGGGTACAGTAGGAAGCATTCAAGGCTCTACATCAGGCACCACCTACAACACCACCTCAGACCGCCGCCTGAAGACTGACATTCAGCCTATCGCAAACGGCACTGAGAAGCTGATGGCGATGAACCCTGTCACTCACAAGTGGAAGGCTGATCCGCATACTGGTGAAACAGTCCACGGCTTTATCGCACAGGAAATGCAGGAGATCGTCCCAGAGGCTGTATCAGGTGATCCTGATGGCGAAGAGATGATGTCTATGGATTACGGACGCATCACGCCTGTCCTAGTGGCAGCATTGCAGGACGCACATAAAAAGATTGAGGCGTTGGAAGAACGTCTAGCAGAATTGGAGGCTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
855a08db5f0873ac7e43b67cb059c5cdc490907b1a2dba2430c935dbfaa5ee0c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6582
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Newly identified HMO-2011-type phages reveal genomic diversity and biogeographic pattern of marine HMO-2011-type group Qin,F., Du,S., Zhang,Z., Ying,H., Wu,Y., Yang,M. and Zhao,Y. 2022-01-12 — GenBank