Protein

View in Explore
Genbank accession
UHD87208.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTHKTGRAHLQRYPSTDQGTLGSLTLPNGEVLSTIELPDRDNRTSISRIPAGLYVVNPWKSNKFGNVWILEDVEGRTYILIHKGNVAGDRALGYKTHSNGCILIGVSFGVLWGQLAVLNSAKALRMCHEALDDYEQFELMIEDF
Physico‐chemical
properties
protein length:144 AA
molecular weight: 16045,06950 Da
isoelectric point:6,18160
aromaticity:0,08333
hydropathy:-0,21181

Domains

Domains [InterPro]
IPR043732
STR
9–131
IPR043732
UHD87208.1
1 144
Architecture
STR
STR 9-131 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D4
[NCBI] 		2877522 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UHD87208.1 [NCBI]
Genbank nucleotide accession
OK381870.1 [NCBI]
CDS location
range 44 -> 478
strand +
CDS
ATGACACATAAAACAGGGCGTGCACACCTTCAGAGATACCCAAGCACGGATCAGGGCACACTAGGAAGTTTGACGCTTCCAAACGGCGAGGTTTTAAGCACGATTGAATTACCCGACCGGGACAACCGCACAAGTATTTCTCGCATCCCGGCGGGCTTATATGTTGTTAACCCTTGGAAGTCTAACAAGTTCGGCAACGTGTGGATCTTGGAAGACGTAGAGGGGCGCACTTATATTTTGATTCACAAAGGCAACGTAGCCGGGGATCGCGCACTAGGTTATAAAACGCATTCTAACGGCTGCATTCTGATCGGCGTTAGCTTTGGCGTGCTTTGGGGGCAACTAGCGGTTTTGAATAGCGCTAAAGCCCTTCGCATGTGTCACGAAGCTTTAGACGATTACGAACAATTCGAACTAATGATAGAGGACTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
208953590d9d2dd21ae80812de0a3dc8ee0de07f94e62e8f0ccc45a98dc2ff54
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8186
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and Biological Profile of a Novel Bacteriophage, Vibrio phage Virtus, Which Improves Survival of Sparus aurata Larvae Challenged with Vibrio harveyi Droubogiannis,S. and Katharios,P. 2022 35745484 GenBank