Protein

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Genbank accession
AGG58142.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKILTLHRNYFPHGVFSYLCDENGNAILKTVERPWKNNQAGISCIPEGTYDLLPHDSPKFGKCYALEAPTLGVTRFGPSQRTHILIHKANRAVQLEGCIAPGMDFGVVNNEWAVINSGTAFDYFMAHLGGEKAKLVIRRA
Physico‐chemical
properties
protein length:140 AA
molecular weight: 15558,73210 Da
isoelectric point:8,72040
aromaticity:0,10000
hydropathy:-0,17500

Domains

Domains [InterPro]
IPR043732
STR
6–128
IPR043732
AGG58142.1
1 140
Architecture
STR
STR 6-128 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage martha 12B12
[NCBI] 		573175 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGG58142.1 [NCBI]
Genbank nucleotide accession
HQ316581.1 [NCBI]
CDS location
range 23132 -> 23554
strand -
CDS
ATGAAAATCCTAACTCTCCATCGCAATTATTTCCCTCATGGTGTTTTTTCTTATCTGTGCGATGAGAATGGAAACGCTATTCTCAAGACCGTTGAACGACCTTGGAAAAATAACCAAGCTGGCATTTCATGTATTCCAGAAGGCACCTACGACCTGCTACCACATGACAGCCCGAAGTTTGGCAAATGCTACGCACTAGAAGCACCTACCCTTGGTGTTACTCGATTCGGCCCTTCTCAACGAACTCATATTCTTATCCACAAAGCAAACCGAGCAGTACAGCTTGAAGGTTGTATTGCACCAGGCATGGACTTTGGTGTGGTGAATAATGAATGGGCTGTTATCAATTCAGGCACGGCCTTCGATTATTTTATGGCTCACCTTGGTGGTGAAAAAGCCAAGCTTGTTATTCGTCGAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4a3c366fb1894ec6fe0989a85f2ea4831eb512671ad1a0691c97e0499f61991a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8826
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage martha 12B12 Henn,M.R., Polz,M., Kauffman,A.K.M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank