Protein

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Genbank accession
NP_046775.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSIKFRTVITTAGAAKLAAATAPGRRKVGITTMAVGDGGGKLPVPDAGQTGLIHEVWRHALNKISQDKRNSNYIIAELVIPPEVGGFWMRELGLYDDAGTLIAVANMAESYKPALAEGSGRWQTCRMVIIVSSVASVELTIDTTTVMATQDYVDDKIAEHEQSRRHPDASLTAKGFTQLSSATNSTSETLAATPKAVKAAYDLANGKYTAQDATTARKGLVQLSSATNSTSETLAATPKAVKTVMDETNKKAPLNSPALTGTPTTPTARQGTNNTQIANTAFVMAAIAALVDSSPDALNTLNELAAALGNDPNFATTMTNALAGKQPKDATLTALAGLATAADRFPYFTGNDVASLATLTKVGRDILAKSTVAAVIEYLGLQETVNRAGNAVQKNGDTLSGGLTFENDSILAWIRNTDWAKIGFKNDADGDTDSYMWFETGDNGNEYFKWRSRQSTTTKDLMTLKWDALNILVNAVINGCFGVGTTNALGGSSIVLGDNDTGFKQNGDGILDVYANSQRVFRFQNGVAIAFKNIQAGDSKKFSLSSSNTSTKNITFNLWGASTRPVVAELGDEAGWHFYSQRNTDNSVIFAVNGQMQPSNWGNFDSRYVKDVRLGTRVVQLMARGGRYEKAGHTITGLRIIGEVDGDDEAIFRPIQKYINGTWYNVAQV
Physico‐chemical
properties
protein length:669 AA
molecular weight: 71503,33440 Da
isoelectric point:6,63939
aromaticity:0,07474
hydropathy:-0,23901

Domains

Domains [InterPro]
IPR022225
ATT
1–151
IPR022225 IPR005068 IPR005068 DC_0128
DC_1371
STR
1–414
DC_1371 IPR048390
IPR051934
Unmapped
2–201
IPR051934
NP_046775.1
1 669
Architecture
ATT
STR
ATT
RBD
ATT 1-151 | STR 152-418 | ATT 419-490 | RBD 491-645 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteriophage P2
[NCBI] 		2905681 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_046775.1 [NCBI]
Genbank nucleotide accession
NC_001895.1 [NCBI]
CDS location
range 12734 -> 14743
strand +
CDS
ATGAGCATAAAATTCAGAACCGTTATCACCACTGCCGGTGCAGCAAAGCTGGCAGCGGCAACCGCGCCGGGAAGGCGGAAGGTCGGCATTACCACGATGGCCGTCGGGGATGGCGGTGGTAAATTGCCTGTCCCGGATGCCGGACAGACCGGGCTTATCCATGAAGTCTGGCGACATGCGCTGAACAAAATCAGCCAGGACAAACGAAACAGTAATTATATTATCGCCGAGCTGGTTATTCCGCCGGAGGTGGGCGGTTTCTGGATGCGTGAGCTTGGCCTGTACGATGATGCGGGAACGTTAATTGCCGTGGCGAACATGGCCGAAAGCTATAAGCCAGCCCTTGCCGAAGGCTCAGGACGTTGGCAGACCTGTCGCATGGTCATCATCGTCAGCAGTGTGGCCTCAGTGGAGCTGACCATTGACACCACAACGGTGATGGCGACGCAGGATTACGTTGATGACAAAATTGCAGAGCACGAACAGTCACGACGTCACCCGGACGCCTCGCTGACAGCAAAAGGTTTTACTCAGTTAAGCAGTGCGACCAACAGCACGTCTGAAACACTGGCCGCAACGCCGAAAGCGGTAAAGGCCGCGTATGACCTGGCTAACGGGAAATATACCGCACAGGACGCCACCACAGCGCGAAAAGGCCTTGTCCAGCTTAGTAGCGCCACCAACAGCACGTCTGAAACGCTCGCCGCAACACCAAAAGCCGTTAAGACGGTAATGGATGAAACGAACAAAAAAGCGCCATTAAACAGCCCTGCACTGACCGGAACGCCAACGACGCCAACTGCGCGACAGGGAACGAATAATACTCAGATCGCAAACACGGCTTTCGTTATGGCCGCGATTGCCGCCCTTGTAGACTCGTCGCCTGACGCACTGAATACGCTGAACGAGCTGGCGGCGGCGCTGGGCAATGACCCGAATTTTGCTACCACCATGACTAATGCGCTTGCGGGTAAGCAACCGAAAGATGCTACCCTGACGGCGCTGGCGGGGCTTGCTACTGCGGCAGACAGGTTTCCGTATTTTACGGGGAATGATGTTGCCAGCCTGGCGACCCTGACAAAAGTCGGGCGGGATATTCTGGCTAAATCGACCGTTGCCGCCGTTATCGAATATCTCGGTTTACAGGAAACGGTAAACCGAGCCGGGAACGCCGTGCAAAAAAATGGCGATACCTTGTCCGGTGGACTTACTTTTGAAAACGACTCAATCCTTGCCTGGATTCGAAATACTGACTGGGCGAAGATTGGATTTAAAAATGATGCCGATGGTGACACTGATTCATACATGTGGTTTGAAACGGGGGATAACGGCAATGAATATTTCAAATGGAGAAGCCGCCAGAGTACCACAACAAAAGACCTGATGACGTTGAAATGGGATGCACTAAATATTCTTGTTAATGCCGTCATTAATGGCTGTTTTGGAGTTGGTACGACGAATGCACTAGGTGGTAGCTCTATTGTTCTTGGTGATAATGATACCGGATTTAAACAGAATGGAGACGGTATTCTTGATGTTTATGCTAACAGTCAGCGTGTATTCCGTTTTCAGAATGGAGTGGCTATTGCTTTTAAAAATATTCAGGCAGGTGATAGTAAAAAGTTCTCGCTATCCAGCTCTAATACATCCACGAAGAATATTACCTTTAATTTATGGGGTGCTTCCACCCGTCCAGTGGTTGCAGAGTTAGGCGATGAGGCCGGATGGCATTTCTATAGCCAGCGAAATACAGATAACTCGGTAATATTTGCTGTTAACGGTCAGATGCAACCCAGCAACTGGGGAAATTTTGATTCCCGCTATGTGAAAGATGTTCGCCTGGGTACGCGAGTTGTTCAATTGATGGCGCGAGGTGGTCGTTATGAAAAAGCCGGACACACGATTACCGGATTAAGAATCATTGGTGAAGTAGATGGCGATGATGAAGCCATCTTCAGGCCGATACAAAAATACATCAATGGCACATGGTATAACGTTGCGCAGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8364d1c26e9b7cf798dc5c2bcfa97d52f1a6b67448d9da534ae1c820c5ba0e8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7379
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Programmed translational frameshift in the bacteriophage P2 FETUD tail gene operon Christie,G.E., Temple,L.M., Bartlett,B.A. and Goodwin,T.S. 2002 12426340 GenBank
The lysogenic conversion genes of coliphage P2 have unusually high AT content Calendar,R., Yu,S., Myung,H., Barreiro,V., Odegrip,R., Bertani,L.E., Carlson,K., Davenport,L., Mosig,G., Christie,G.E. and Haggard-Ljungquist,E. 1998 — GenBank
Bacteriophage P2: genes involved in baseplate assembly Haggard-Liungquist,E., Jacobsen,E., Rishovd,S., Six,W.S., Nilssen,O., Sunshine,M.G., Lindqvist,B.H., Kim,K.J., Barreiro,V., Koonin,E.V. and Calendar,R. 1995 7483254 GenBank
Functions involved in bacteriophage P2-induced host cell lysis and identification of a new tail gene Ziermann,R., Bartlett,B., Calendar,R. and Christie,G.E. 1994 8051010 GenBank
Molecular cloning and characterization of bacteriophage P2 genes R and S involved in tail completion Linderoth,N.A., Julien,B., Flick,K.E., Calendar,R. and Christie,G.E. 1994 8178426 GenBank
Studies of bacteriophage P2 DNA replication. The DNA sequence of the cis-acting gene A and ori region and construction of a P2 mini-chromosome Liu,Y., Saha,S. and Haggard-Ljungquist,E. 1993 8510152 GenBank
DNA sequences of the tail fiber genes of bacteriophage P2: evidence for horizontal transfer of tail fiber genes among unrelated bacteriophages Haggard-Ljungquist,E., Halling,C. and Calendar,R. 1992 1531648 GenBank
Nucleotide sequence of the DNA packaging and capsid synthesis genes of bacteriophage P2 Linderoth,N.A., Ziermann,R., Haggard-Ljungquist,E., Christie,G.E. and Calendar,R. 1991 1837355 GenBank
Morphopoietic switch mutations of bacteriophage P2 Six,E.W., Sunshine,M.G., Williams,J., Haggard-Ljungquist,E. and Lindqvist,B.H. 1991 1840708 GenBank
Nucleotide sequence of the genes encoding the major tail sheath and tail tube proteins of bacteriophage P2 Temple,L.M., Forsburg,S.L., Calendar,R. and Christie,G.E. 1991 1825255 GenBank
Characterization of the cos sites of bacteriophages P2 and P4 Ziermann,R. and Calendar,R. 1990 2265763 GenBank
The P2 phage old gene: sequence, transcription and translational control Haggard-Ljungquist,E., Barreiro,V., Calendar,R., Kurnit,D.M. and Cheng,H. 1989 2695400 GenBank
Control of prophage integration and excision in bacteriophage P2: nucleotide sequences of the int gene and att sites Yu,A., Bertani,L.E. and Haggard-Ljungquist,E. 1989 2676729 GenBank
The cox protein of bacteriophage P2 inhibits the formation of the repressor protein and autoregulates the early operon Saha,S., Haggard-Ljungquist,E. and Nordstrom,K. 1987 2826134 GenBank
DNA sequences of bacteriophage P2 early genes cox and B and their regulatory sites Haggard-Ljungquist,E., Kockum,K. and Bertani,L.E. 1987 3475531 GenBank
Regulation of bacteriophage P2 late-gene expression: the ogr gene Christie,G.E., Haggard-Ljungquist,E., Feiwell,R. and Calendar,R. 1986 3458177 GenBank
Coliphage P2 late control gene ogr. DNA sequence and product identification Birkeland,N.K. and Lindquist,B.H. 1986 3735430 GenBank
Bacteriophage P2 late promoters. II. Comparison of the four late promoter sequences Christie,G.E. and Calendar,R. 1985 3981640 GenBank
DNA sequences of the repressor gene and operator region of bacteriophage P2 Ljungquist,E., Kockum,K. and Bertani,L.E. 1984 6330728 GenBank
Bacteriophage P2 late promoters. Transcription initiation sites for two late mRNAs Christie,G.E. and Calendar,R. 1983 6308267 GenBank
Recombination between satellite phage P4 and its helper P2. I. In vivo and in vitro construction of P4: :P2 hybrid satellite phage Lindqvist,B.H. 1981 6271624 GenBank
Symmetrical nucleotide sequences in the recognition sites for the ter function of bacteriophages P2, 299 and 186 Murray,K., Isaksson-Forsen,A.G., Challberg,M. and Englund,P.T. 1977 875026 GenBank
Terminal nucleotide sequences of DNA from temperate coliphages Murray,K. and Murray,N.E. 1973 4515740 GenBank
The complete genome of bacteriophage P2 Christie,G.E., Haggard-Ljungquist,E. and Calendar,R. 2016-01-02 — GenBank