Protein

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Genbank accession
XPK43007.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAIIKYPDWLPLAQRASKNLTQQTPFRSDQPAVGAPIFQKLTTDIAATWSLTWKFTLAEERAFIQWLRSPSYLNKANNWFTMMIDLGGSGLQEQTLHFTDYPVQTSIDGGVVTWTGNVIAKKLNNTMDEFDDVLVELDYRWYSWLDEVVNRELPQVYMTPILHMPINMLSPTLDSRIVYEGSQIYYINRNGNLVQSAANEWPLTFIDGTAVGRVPPEKAATNVVEHSNNLLSTSFSRTRTTTTASSLALFQETYAAKLTATSVSGNHYINKAEAPEQETRYSISAIIKADEYQSAAVAIGNRAALDNFQYAYVDLASGYLISGDTSRSFVSNLGGGWYHVSMSADTNDSGGLIYSQINMLSPSNSLTFTGDDISGFIIALIQMEPSEFASSPIVTEESPVTRPTASAKVAMNGATSIDITYSDGSVVNVLAADDYATIPQADSAWGSKYITTIKFNA
Physico‐chemical
properties
protein length:457 AA
molecular weight: 50276,68890 Da
isoelectric point:4,68850
aromaticity:0,10503
hydropathy:-0,15164

Domains

Domains [InterPro]
DC_0353
STR
14–457
DC_0353
NF048003
Unmapped
217–403
NF048003
XPK43007.1
1 457
Architecture
STR
STR 14-457
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SandraMuster_Bas78
[NCBI] 		3398432 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK43007.1 [NCBI]
Genbank nucleotide accession
PQ850625.1 [NCBI]
CDS location
range 27804 -> 29177
strand +
CDS
ATGGCTATCATCAAATACCCTGACTGGCTTCCACTTGCACAACGCGCCAGTAAAAACCTGACACAGCAAACTCCGTTCCGCAGTGACCAGCCTGCCGTCGGCGCGCCAATTTTTCAGAAGCTGACAACTGATATTGCGGCGACATGGAGCCTGACGTGGAAGTTTACGCTGGCAGAGGAGCGCGCTTTTATCCAGTGGTTGCGTAGCCCGAGTTACCTCAACAAAGCAAACAACTGGTTCACCATGATGATTGACCTCGGCGGCAGCGGATTGCAGGAGCAGACGCTGCATTTTACCGATTATCCGGTGCAAACCAGCATTGATGGCGGCGTGGTCACGTGGACCGGCAATGTTATTGCCAAAAAACTCAATAACACTATGGATGAGTTTGATGATGTTCTGGTTGAACTGGATTACAGATGGTATAGCTGGCTGGATGAAGTCGTTAATCGCGAACTCCCGCAAGTCTATATGACACCGATACTGCACATGCCAATTAACATGTTGTCACCAACGCTTGATAGCCGCATTGTTTACGAGGGGTCACAGATTTACTATATCAACCGAAACGGCAATCTTGTGCAATCAGCCGCAAATGAATGGCCTCTTACGTTTATTGACGGAACTGCAGTTGGGCGTGTGCCGCCGGAAAAGGCTGCTACCAATGTGGTAGAACATTCTAACAACTTACTATCTACATCATTTTCACGTACCAGAACAACAACCACGGCGAGTTCTTTGGCGTTATTCCAAGAAACTTATGCTGCTAAATTAACCGCAACGTCGGTATCAGGTAACCATTATATAAACAAGGCAGAGGCCCCAGAACAAGAAACAAGATACTCTATTAGTGCTATTATAAAAGCAGATGAGTACCAGTCGGCAGCGGTAGCCATCGGCAACCGAGCCGCTTTAGATAATTTCCAGTATGCCTATGTTGACTTAGCCTCCGGCTATTTGATATCAGGCGACACCTCAAGGTCGTTCGTAAGCAATCTTGGTGGTGGGTGGTATCACGTTTCAATGTCAGCGGACACTAACGACTCCGGCGGATTGATTTATTCGCAGATAAACATGTTGTCGCCGTCTAACTCCCTCACCTTCACAGGGGATGATATCAGTGGGTTCATTATAGCCCTAATCCAGATGGAGCCTTCAGAGTTTGCCTCCTCCCCGATAGTGACCGAGGAGTCACCGGTAACTCGTCCAACGGCATCAGCAAAAGTGGCAATGAACGGCGCGACAAGCATCGACATTACCTATTCCGACGGCTCTGTGGTAAACGTTCTGGCGGCAGATGATTACGCAACCATCCCGCAGGCTGATTCCGCGTGGGGTAGCAAGTACATCACAACAATAAAATTCAACGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dcef26f87c90bd97e5a0e6207cea1190d3b136596ba62dfd68777a5476dd4f55
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8856
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank