Protein

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Genbank accession
WYD66290.1 [GenBank]
Protein name
tail collar domain
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MWTVTTLNDYRRCEKMAKTLFTSGKRVAAEWFRAIQDIVFDDQDLDGHYSRLDDDSLSNAPGNIKTEFYSLRDALRVLPLTGLNIKVTAASVALQNGTSISIPETQFTLPDNATRFVYVNSTGALEVGASVPATGVLTARVVTSGGAITTISDLRERIGYQVAPISIAASPSFVMPSGAMVPYAGSVAPSGWLVCDGSVILRAQYPDLFAAIGTTYNIGTVASDSFMLPDTRDRSVRGSSSTTARGTRGGQDSVTLTTGNLPAHSHDVNDPGHAHSVSDFGHTHGVQDPGHTHFVANSYDEKGGGTVPGQNLSNQVATDTLWQVNAQQSGTNVSILGAGSNIAVNGSGTGITTQSVGSGTAFDNRSQFLAMPHIIKV
Physico‐chemical
properties
protein length:377 AA
molecular weight: 39682,62170 Da
isoelectric point:5,75929
aromaticity:0,06897
hydropathy:-0,12626

Domains

Domains [InterPro]
DC_0033
STR
6–377
DC_0033
IPR037053
ATT
171–232
IPR037053
SSF88874
STR
173–287
SSF88874
IPR011083
ATT
178–235
IPR011083
WYD66290.1
1 377
Architecture
STR
ATT
STR
STR 6-170 | ATT 171-235 | STR 236-377
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYD66290.1
1 377
Domain Start End Length (AA) Confidence
N-terminal 1 281 281 0,6036
Central domain 282 366 86 0,0041
C-terminal 367 377 10 0,9829
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-281
Central
282-366
C-terminal
367-377

Taxonomy

  Name Taxonomy ID Lineage
Phage Leptolyngbya phage Lbo402-yong5
[NCBI] 		3117725 No lineage information
Host Leptolyngbya boryana
[NCBI] 		1184 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYD66290.1 [NCBI]
Genbank nucleotide accession
OR994056 [NCBI]
CDS location
range 39868 -> 41001
strand -
CDS
ATGTGGACAGTAACCACATTGAACGATTATCGACGATGCGAAAAAATGGCAAAGACTCTATTTACCAGTGGTAAGCGGGTCGCTGCGGAATGGTTCCGAGCGATTCAGGACATTGTATTCGATGACCAAGATTTAGACGGTCATTATTCTCGACTAGATGATGATTCACTGAGTAACGCACCGGGGAATATCAAAACTGAGTTTTATTCGCTGCGAGACGCGCTTCGAGTTTTGCCATTGACGGGGCTAAATATTAAAGTCACAGCGGCATCGGTCGCTTTGCAGAATGGCACGTCGATTTCTATTCCTGAGACACAGTTCACATTGCCAGATAACGCGACGCGCTTCGTCTATGTTAATTCGACGGGTGCATTAGAAGTCGGTGCGTCTGTCCCCGCGACGGGTGTGTTAACCGCACGTGTTGTTACCAGTGGGGGCGCAATCACTACGATTAGTGACCTACGAGAGCGCATTGGTTATCAAGTCGCCCCGATTTCTATCGCTGCGTCGCCTTCGTTCGTCATGCCTTCGGGCGCAATGGTTCCTTACGCTGGCAGCGTTGCCCCCTCCGGTTGGTTAGTCTGCGACGGTTCGGTTATTCTCCGAGCGCAATACCCTGATTTATTCGCAGCCATCGGAACCACATACAACATTGGGACGGTCGCGTCGGATTCGTTCATGTTGCCAGATACCCGTGATAGAAGTGTTCGGGGTTCCTCTAGCACGACAGCGCGGGGCACTCGCGGGGGTCAAGACTCAGTGACTCTGACGACGGGGAATTTACCCGCACACAGTCACGATGTCAATGACCCCGGACACGCCCACAGTGTCTCGGACTTTGGGCACACCCACGGGGTACAAGACCCCGGACACACACACTTTGTCGCGAACTCTTACGACGAGAAAGGGGGCGGCACTGTACCGGGTCAAAACCTATCGAACCAAGTCGCTACAGATACACTCTGGCAAGTTAACGCACAGCAATCAGGAACCAACGTATCTATCCTCGGTGCGGGGTCTAATATCGCTGTGAATGGTTCGGGCACTGGCATCACGACTCAAAGCGTTGGTTCGGGCACTGCGTTCGATAACCGAAGCCAATTTCTCGCGATGCCGCACATTATCAAAGTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e48bdccbe94a9845c41e63daa8bfc255a947a3afd7c1601a9f4941de281bc042
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7386
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50