Protein

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Genbank accession
WOR80500.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,68
Protein sequence
MGLEVATYIDQLVPTNPTGSDLKSFGDDHIRLIKSAIKNTFPSINQAVTVTAAQLNSVADTTQYVKPGMVIMWAGTLAQIPAGWKLCNGVGTTSNGIPVPNLIGAFPWGIDGTSQTVGTRGGNANIVWEGLTEGHALTLAQIPAHTHTWRTRGATTLTGSAGDSGALTGGSGNAANTNLETGSAGQGQAHTHAVKINMPFGNIPPFCAVFFIIKN
Physico‐chemical
properties
protein length:215 AA
molecular weight: 22235,84510 Da
isoelectric point:7,00770
aromaticity:0,06512
hydropathy:0,00884

Domains

Domains [InterPro]
DC_2164
STR
3–215
DC_2164
SSF88874
STR
61–214
SSF88874
WOR80500.1
1 215
Architecture
STR
STR 3-215
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSP30
[NCBI] 		3077135 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WOR80500.1 [NCBI]
Genbank nucleotide accession
OR538763.1 [NCBI]
CDS location
range 35816 -> 36463
strand -
CDS
ATGGGTCTTGAGGTCGCAACGTATATCGATCAGTTGGTGCCTACGAACCCTACCGGCTCTGATCTGAAGTCCTTTGGGGATGACCATATTCGCCTCATCAAGAGTGCCATTAAGAATACCTTCCCCAGTATTAACCAAGCTGTCACTGTAACAGCAGCCCAATTGAACTCAGTCGCAGATACCACCCAATATGTGAAACCTGGGATGGTTATCATGTGGGCGGGTACTCTTGCTCAGATCCCAGCAGGTTGGAAACTTTGTAATGGCGTAGGGACAACCTCTAATGGCATCCCCGTACCTAACCTCATCGGAGCATTCCCTTGGGGTATTGATGGTACATCCCAAACTGTAGGTACTCGGGGTGGTAACGCTAACATCGTATGGGAAGGTCTTACCGAGGGCCACGCTCTTACGCTAGCCCAAATACCAGCACACACTCACACTTGGCGTACCCGAGGGGCTACCACCCTGACTGGTTCTGCTGGTGATTCTGGTGCGTTGACTGGTGGTTCTGGTAACGCTGCCAATACCAACCTAGAGACTGGCTCTGCTGGTCAAGGACAGGCACACACCCACGCTGTTAAGATCAACATGCCATTTGGCAACATCCCGCCGTTCTGTGCTGTATTCTTCATTATTAAGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
00580e586308881cb3e6f3192dcb7198276317ccdd951d793bf5a71e06f6780b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7577
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploiting Phage-Antibiotic Synergies to Disrupt Pseudomonas aeruginosa PAO1 Biofilms in the context of Orthopedic Infections De Soir,S. and Wagemans,J. 2024-01-11 — GenBank