Protein

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Genbank accession
WVQ00133.1 [GenBank]
Protein name
tail collar domain containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MALNFPSDTSNPYIDPSSGLKYIFNASIGAWEAAIQPPAIVSATQPDITIEGFFWWDSINNVLNVYENGQWVTAGQQGGGSTTVTVGSTPPGAPTGGDLWWDTVSGRLFIYYTDVDSSQWMDASPNLAGSNGGGVVAGNSAPANAVEGDLWYNTLNDTLNIYHNNVWETTQNTVAGVATLSSTTPITLGGTASDPVVGVSNASNSALGVVRLATQSEANTGTSTTAALTPGTLTNAIDNYLPAASDVQAGVVELATSAEIIAGTETDKAMTPAAYAASVSSLGIGNPPGTVITFAGSTAPTGYLECSGQQVDRVTYADLFAAVGTTFGVGDGTTTFNLPDLRGEFVRGWDNGRGIDSGRAFGSTQNSANLAHSHTITDPGHQHNATLTDDTRNVADGGVTGGNVPTTAVTDNAVTGITVDSDGGTEARPRNIALLYCIKF
Physico‐chemical
properties
protein length:440 AA
molecular weight: 45176,72880 Da
isoelectric point:4,08413
aromaticity:0,07727
hydropathy:-0,10227

Domains

Domains [InterPro]
DC_1413
STR
7–440
DC_1413
IPR037053
ATT
277–342
IPR037053
SSF88874
STR
286–439
SSF88874
IPR011083
ATT
289–346
IPR011083
WVQ00133.1
1 440
Architecture
STR
ATT
STR
STR 7-276 | ATT 277-346 | STR 347-440
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage MA10
[NCBI] 		3117465 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVQ00133.1 [NCBI]
Genbank nucleotide accession
PP110483 [NCBI]
CDS location
range 138804 -> 140126
strand -
CDS
ATGGCACTGAATTTCCCTTCAGATACTTCCAATCCCTACATTGATCCTTCGTCGGGTCTCAAATATATCTTTAACGCCTCGATTGGTGCGTGGGAAGCTGCCATTCAGCCTCCTGCTATTGTATCGGCAACTCAACCCGACATCACCATTGAAGGTTTCTTCTGGTGGGACTCCATCAATAACGTCCTGAACGTTTATGAGAACGGTCAGTGGGTTACTGCGGGACAGCAGGGTGGTGGTTCAACTACCGTTACTGTTGGTAGCACTCCCCCTGGAGCACCTACCGGTGGTGACCTGTGGTGGGATACTGTATCAGGTCGTCTCTTCATTTATTATACCGACGTCGATTCTTCTCAGTGGATGGACGCTTCACCTAACCTCGCCGGTTCTAACGGCGGTGGTGTTGTTGCTGGTAATAGTGCCCCAGCAAACGCCGTAGAAGGTGACCTCTGGTATAACACTCTGAACGACACCCTGAACATCTACCACAACAACGTTTGGGAGACCACTCAGAACACAGTTGCTGGTGTCGCTACGCTTTCTTCTACGACTCCTATCACTCTCGGTGGAACCGCCTCAGACCCCGTTGTGGGCGTCTCTAACGCCTCTAACAGCGCCCTTGGGGTAGTTCGTCTCGCTACTCAGTCAGAAGCTAATACGGGCACCTCCACGACCGCTGCGCTGACCCCCGGCACCCTGACGAACGCTATTGACAACTACCTCCCTGCTGCCTCTGATGTTCAGGCTGGTGTTGTTGAGTTGGCGACCTCTGCTGAAATTATTGCTGGCACCGAGACCGACAAGGCTATGACCCCCGCTGCTTACGCAGCTTCGGTTAGCAGCCTGGGTATTGGTAACCCTCCCGGAACCGTTATTACCTTTGCTGGTTCCACTGCCCCTACCGGATACTTGGAGTGTTCTGGTCAGCAGGTTGATAGGGTAACCTATGCCGACCTGTTCGCTGCTGTTGGCACCACCTTTGGTGTAGGTGACGGCACGACGACTTTCAACCTCCCTGACCTCCGTGGTGAGTTTGTCCGTGGTTGGGATAACGGTCGTGGTATTGACTCCGGTCGTGCTTTCGGTTCTACCCAGAACTCCGCCAACCTGGCTCACAGTCACACCATCACTGACCCCGGCCACCAACACAACGCAACCCTTACCGACGACACCCGTAACGTCGCTGACGGTGGTGTTACCGGTGGTAACGTCCCCACCACTGCAGTTACCGACAACGCAGTGACCGGTATTACAGTTGATAGCGACGGTGGAACTGAGGCACGTCCTCGTAACATTGCTCTGCTCTACTGCATCAAGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9aabc083be8e5291419561553b2d832a1d65d83c456cd058806e87e470713760
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8089
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50