Protein

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Genbank accession
NP_050163.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,73
Protein sequence
MGVICILLLGMKQLVELITQSFPMLPILQKNNHSQTEEPFDGKATVQYLANGTINLFSTPYKGHTPVNSIRNGKYLKFVAKTDKQTLNNDIWYKTDTGGWVEASLITFDKSGNYVVNKITAQGTLEVGDDIQGIIVKNDGVGTVSYAGPGKVPLYTSPFGGHKSGQYLSNGQSYKIYWKAKDIDGTVWYNLGNRDTQWISSKYFVLSKTGDYATQKAYGRLSINGNVTVMSGPGGTGNVISWNNKGQYPIYDISTDYEGTKWYHIGQQNGHQLWVKSGDNVSFKEPGTVEYKEDDAAKANIKQTAQVPVYSDPSGISPTGKYYSLGSLLRITAQSTSQGKTFYEVGTNQWINSDFFSFAHATDVAPGEDDSNAKPEVSEQTLELDETVLVSEYARITNAPLRVQAVDLSSYGIGNDKNKLLAVAKAYMQEYRIGYPNISLTVSYDQMQGEYQKLTQVDLYDYVSVLFDEVGIFEKAQCTSITWDPVREIATSITIGQLPISYDHALNNFVTNMVKKNTTTATKRATHLFGELKQVMEEKDQDQKAGLLKLTRQLSIDDQAWRDSYDRLQSMITSINTTVQDVHNWIAGGGGGEITAYPNWQKPTELRALSNGGGYLRFNAEGLEYVGRDGVARSAIDSQGRLIAERITGGTITGVKLEGITVDGDSYIRSIGGDGKVAVMSGDHGFSCTAPGKEKVALDWDQNWGVLRIGNQYLYASDIAWIRQQRGGRIH
Physico‐chemical
properties
protein length:731 AA
molecular weight: 80707,32930 Da
isoelectric point:5,86581
aromaticity:0,10123
hydropathy:-0,43434

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
NP_050163.1
1 731
Domain Start End Length (AA) Confidence
N-terminal 1 37 37 0,9902
Central domain 38 709 673 0,2391
C-terminal 710 731 21 0,8019
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-37
Central
38-709
C-terminal
710-731

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage phiadh
[NCBI] 		12417 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus gasseri
[NCBI] 		1596 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_050163.1 [NCBI]
Genbank nucleotide accession
NC_000896 [NCBI]
CDS location
range 35121 -> 37316
strand +
CDS
ATGGGCGTAATATGCATTCTCTTACTAGGGATGAAACAACTAGTGGAACTTATAACGCAATCATTCCCTATGTTACCTATTCTCCAGAAGAACAACCACAGCCAGACGGAGGAACCATTTGATGGAAAAGCCACAGTTCAATATTTGGCTAACGGTACAATTAACCTTTTTAGTACCCCATATAAAGGCCACACCCCTGTAAACAGTATCAGGAATGGCAAATACTTAAAGTTTGTTGCGAAAACTGATAAGCAAACGCTCAATAATGATATCTGGTATAAGACTGATACAGGTGGTTGGGTTGAAGCCAGTTTGATTACATTTGACAAGTCAGGTAACTATGTAGTTAATAAGATCACTGCTCAGGGAACTCTTGAAGTGGGTGATGATATTCAAGGCATAATTGTTAAGAATGACGGTGTTGGTACGGTTTCATACGCAGGTCCTGGTAAAGTGCCACTTTATACTTCACCTTTTGGAGGTCATAAGAGCGGACAATACCTATCTAATGGTCAAAGCTATAAGATTTATTGGAAGGCAAAAGATATCGATGGAACTGTTTGGTACAATTTAGGCAATCGAGATACGCAATGGATTTCATCTAAATATTTTGTCTTATCAAAGACTGGGGACTATGCAACTCAAAAAGCCTATGGCCGTTTAAGCATTAACGGTAATGTAACAGTGATGTCAGGTCCTGGTGGGACAGGAAACGTAATTAGCTGGAATAATAAAGGTCAATATCCGATTTATGATATTTCAACTGACTATGAAGGCACTAAGTGGTATCACATTGGTCAGCAGAATGGCCATCAGCTTTGGGTTAAATCTGGCGATAATGTTAGCTTTAAAGAACCTGGAACAGTTGAATATAAAGAAGATGATGCAGCAAAAGCTAATATTAAGCAAACTGCACAAGTTCCTGTATATAGTGATCCAAGTGGTATAAGTCCAACCGGCAAATACTATAGCTTAGGTAGTTTACTAAGAATTACAGCGCAGTCAACTAGTCAAGGTAAAACCTTTTATGAAGTTGGAACTAATCAATGGATTAATTCAGATTTCTTCAGTTTCGCTCATGCCACAGATGTAGCACCAGGTGAAGATGATTCGAATGCTAAGCCTGAGGTATCAGAACAAACTTTAGAATTAGACGAAACAGTGCTAGTTTCTGAATATGCACGGATTACTAACGCACCTTTGAGAGTGCAAGCAGTAGATTTATCTTCTTATGGAATTGGTAATGATAAGAACAAGTTGCTAGCAGTTGCTAAAGCTTATATGCAAGAATACAGGATCGGTTACCCAAATATTTCGCTTACTGTTTCATATGATCAAATGCAAGGCGAGTATCAAAAATTAACTCAAGTTGACTTATATGATTATGTGAGTGTGTTATTCGATGAAGTAGGAATTTTTGAAAAAGCTCAATGCACTTCCATAACTTGGGATCCTGTTAGAGAGATTGCTACCAGTATTACAATAGGCCAGTTGCCTATTAGTTATGACCATGCTTTAAACAATTTTGTCACTAATATGGTTAAAAAAAATACAACGACGGCTACTAAAAGAGCGACTCACTTGTTTGGCGAATTAAAGCAAGTAATGGAAGAAAAGGACCAAGATCAAAAGGCTGGGCTACTTAAATTAACTAGGCAACTTAGTATTGACGATCAAGCTTGGAGAGATAGCTATGATCGATTGCAAAGCATGATTACTTCCATAAACACGACGGTTCAAGACGTCCACAACTGGATTGCCGGTGGTGGCGGTGGTGAAATCACTGCGTATCCTAATTGGCAGAAACCAACTGAACTAAGGGCCTTGAGTAATGGAGGGGGTTATCTCCGATTTAATGCTGAAGGCTTGGAATACGTTGGACGCGATGGAGTTGCTAGAAGTGCTATAGACAGTCAAGGTCGGCTAATTGCTGAAAGAATTACTGGTGGTACGATCACAGGTGTTAAGCTTGAAGGTATCACAGTAGATGGGGATTCTTACATTCGTTCAATTGGTGGCGATGGAAAAGTTGCAGTTATGTCGGGCGACCATGGCTTTTCTTGCACAGCACCTGGCAAAGAAAAAGTTGCTCTTGATTGGGATCAAAATTGGGGAGTATTGAGAATTGGAAATCAATATTTATATGCTTCCGACATTGCTTGGATTCGTCAACAACGAGGTGGCAGAATTCATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c2e642a999f76eb6c43dc45cb8f481aec0211ce9ef4a19116562634ccfbe6b4a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6527
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Structure of a genome region of the Lactobacillus gasseri temperate phage phi adh covering a repressor gene and cognate promoters Engel,G., Altermann,E., Klein,J. and Henrich,B. 1998 — GenBank