Protein

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Genbank accession
BAW19005.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MHRPSIKSILALAAVAFTLTACGGGGGGSNDSGNTNTTPISNAKQISGKAVDGYLAGATVCLDLNSNGICDAGEPTALTDDKGGYSISYDGDATGKKLLVVVDHNTKDLSRPAGYVFPASFALTATVDGLTGQNVTPLTTMQQSLMEQGMSKDDATKAVVSFVGGSVNLRDDYIANGDHTSSAFASQVVDKVAQFAKNGVAGADTVRGLMNAIVAKGGIDNVTQADVDAQVAKPVLVTDVDAKTVLVSDMLVYNGTEMMNGTGEVQVRQRFTQNADGVHAFREAFINGQWGTPDATKFTSYLGHYHMLNNGSWSGLLSEADLDKPMAVQSTNGNAMQLIDAITGGPIALEFRRVTVGGKSFADGMTGWMDNTTRNALQGSFPVGAEATVGILTRGFDLIELDLTACQNSANAIVQDGVSHCNYLGDRNTTYTSIDQIFGTEVALNGNVKATLAADGSVVIRDINTNQVLLSATWSRQANNSNVVFLNLDPAAIGSVQLPYRSEIGEGGNIALALHAGRIQLGSRMPGSVAVSVFGLRGPVFDQLFAAIPK
Physico‐chemical
properties
protein length:550 AA
molecular weight: 57334,61900 Da
isoelectric point:4,93126
aromaticity:0,06182
hydropathy:-0,01891

Domains

Domains [InterPro]
PS51257
STR
1–22
PS51257
DC_2059
STR
1–550
DC_2059
BAW19005.1
1 550
Architecture
STR
STR 1-550
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RP12
[NCBI] 		1923889 Uroviricota > Caudoviricetes > Chimalliviridae > Ripduovirus RP12 >
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAW19005.1 [NCBI]
Genbank nucleotide accession
AP017924.1 [NCBI]
CDS location
range 31163 -> 32815
strand -
CDS
ATGCACCGTCCTTCCATCAAATCCATTCTGGCCCTTGCGGCTGTGGCGTTCACCCTCACCGCTTGCGGCGGTGGCGGTGGTGGCAGTAACGATAGCGGTAATACGAACACGACCCCGATCTCCAACGCCAAGCAAATCTCCGGCAAGGCCGTCGACGGCTACCTTGCTGGCGCCACTGTCTGTCTCGACTTGAACAGCAATGGCATCTGCGACGCTGGCGAACCGACCGCCCTGACTGACGACAAGGGCGGCTATTCGATCAGCTACGACGGCGATGCTACCGGCAAGAAGCTGCTGGTTGTGGTCGATCACAATACCAAGGACTTGTCGCGGCCTGCTGGCTACGTCTTCCCGGCATCCTTCGCTCTGACCGCCACGGTCGACGGTCTGACTGGTCAGAACGTCACGCCGCTCACGACGATGCAACAGTCGCTGATGGAACAAGGCATGTCCAAGGACGACGCTACCAAGGCTGTGGTCTCGTTTGTCGGTGGTTCGGTGAACCTGCGTGACGACTACATCGCCAACGGTGACCATACGTCTTCTGCGTTTGCCTCGCAAGTGGTGGACAAGGTGGCACAGTTCGCCAAGAACGGTGTTGCTGGCGCGGATACAGTGCGCGGGCTGATGAATGCTATCGTCGCTAAGGGCGGTATCGACAACGTCACGCAAGCTGACGTTGATGCGCAGGTTGCCAAACCCGTGCTCGTCACCGACGTGGATGCCAAGACGGTTCTCGTTTCCGACATGTTGGTTTACAACGGTACGGAAATGATGAACGGCACCGGCGAAGTCCAAGTACGTCAGCGCTTCACTCAGAACGCTGACGGTGTCCATGCTTTCCGCGAAGCCTTTATCAACGGCCAGTGGGGTACGCCGGACGCCACCAAGTTCACCTCGTACCTCGGTCACTACCACATGCTGAACAACGGCAGTTGGTCGGGACTGCTGTCCGAAGCTGATCTGGACAAGCCGATGGCGGTTCAATCGACCAACGGCAACGCCATGCAGCTGATCGACGCTATCACCGGTGGCCCGATTGCACTGGAGTTCCGTCGCGTGACAGTGGGCGGCAAGAGCTTTGCTGACGGCATGACTGGCTGGATGGACAACACCACCCGCAATGCTCTGCAGGGCTCGTTCCCGGTTGGTGCTGAAGCAACGGTGGGCATCCTGACTCGCGGTTTCGATCTGATTGAATTGGATCTGACTGCGTGCCAGAATTCGGCCAACGCTATCGTGCAAGACGGCGTGTCGCATTGCAACTACTTGGGTGATCGCAACACGACCTACACTTCGATCGATCAGATCTTCGGCACCGAAGTCGCTCTGAACGGTAACGTCAAAGCAACTCTGGCAGCAGATGGTTCCGTTGTGATCCGCGATATCAACACCAACCAAGTGCTGCTCTCGGCAACGTGGTCGCGTCAAGCGAACAACAGCAACGTGGTGTTCCTGAATCTGGACCCGGCTGCTATCGGTTCGGTTCAGTTGCCGTATCGCAGCGAGATCGGCGAAGGCGGTAACATCGCTCTGGCGCTTCACGCTGGTCGCATTCAACTGGGCAGCCGTATGCCTGGTTCGGTTGCGGTGTCGGTGTTCGGTCTCCGTGGTCCGGTGTTTGATCAGCTGTTCGCAGCAATTCCGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c67bd72a8d37001c896a87a1875cf8a23c98f017851fa510dbf7f3f8710ae42c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7293
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of two jumbo phages RP12 and RP31 infecting the phytopathogen Ralstonia solanacearum Kawasaki,T., Yoshikawa,G., Ogata,H. and Yamada,T. 2020 — GenBank