Protein

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Genbank accession
APZ82863.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,91
Protein sequence
MRTIKNLAVPQNSDPKFPYSTILNETDTNDGTPVVEEIYGDILTNNYKLLQTVDIIPTGTQDSDDDQYQILDALQLLPNKTNDIEQVLSLDSGIWSVPLKIEILPNKYFFLARAAENYIVGSSYTFKGTGTTTYPFSSLGFNSGDEILIIIDQSGVRAYSLVSQAATASEIFTVMGTPVSFNDSNKVWYQDSGSLMSDMPSTAYLESIIRVDVSDGTVLLNDILISNGYALCFCLVPGTNTYFFRQFLLSDLTLSTSVTISGTSFANSSDFSPYVYAESGIVYVTNAMNTTANNYSLTKLIYNAGAATLTFSSTISLDNTFVKTTNAAIKSGLLYTMISGALNSFNLVGGTKVSLGNYLGIAGHIFSFNGFIYFSSGEVAKRWF
Physico‐chemical
properties
protein length:384 AA
molecular weight: 41831,50380 Da
isoelectric point:4,34570
aromaticity:0,11979
hydropathy:0,10365

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APZ82863.1
1 384
Domain Start End Length (AA) Confidence
N-terminal 1 101 101 0,9834
Central domain 102 300 200 0,3450
C-terminal 301 384 83 0,9832
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-101
Central
102-300
C-terminal
301-384

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage FL-1
[NCBI] 		908820 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Flavobacterium sp. B183
[NCBI] 		907046 Bacteroidota > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > Flavobacterium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APZ82863.1 [NCBI]
Genbank nucleotide accession
KY421186 [NCBI]
CDS location
range 44608 -> 45762
strand +
CDS
ATGAGAACGATAAAAAACTTAGCAGTACCACAAAATTCAGATCCTAAATTCCCTTATAGTACCATTCTAAATGAAACAGATACTAATGATGGCACCCCTGTTGTAGAAGAGATTTATGGAGATATTTTAACTAATAATTATAAATTGCTCCAAACAGTAGATATCATTCCTACTGGTACTCAAGATAGTGATGATGATCAATATCAAATATTAGATGCTTTGCAATTATTGCCAAATAAAACTAACGATATAGAACAAGTATTATCGTTAGACTCTGGAATTTGGAGTGTGCCATTAAAAATAGAAATACTTCCAAATAAATATTTTTTTTTAGCTAGAGCAGCAGAAAACTATATTGTTGGTTCATCTTATACTTTTAAGGGAACAGGAACTACTACTTATCCTTTTTCAAGTTTAGGGTTTAATTCAGGAGATGAGATTTTAATAATAATTGATCAATCAGGAGTAAGAGCATATTCATTAGTTTCACAAGCTGCTACCGCTTCTGAAATTTTTACAGTTATGGGCACCCCGGTTTCTTTCAATGATTCAAATAAAGTTTGGTATCAAGATTCAGGAAGTTTAATGAGTGACATGCCAAGTACAGCTTATTTAGAGAGTATTATTCGAGTTGATGTTTCTGACGGAACCGTTTTATTAAATGATATTTTAATCTCAAATGGATATGCGTTATGTTTTTGTTTAGTGCCGGGAACAAATACATATTTTTTTAGGCAATTTTTGTTATCAGACTTAACATTATCAACATCTGTAACTATTTCGGGCACTTCATTTGCTAATTCAAGTGATTTTTCTCCGTATGTGTATGCAGAAAGTGGGATTGTTTATGTTACTAATGCAATGAACACTACTGCAAACAATTATTCTCTTACTAAATTAATTTATAATGCTGGAGCTGCAACATTGACTTTTTCTTCTACAATATCATTAGATAATACATTTGTGAAAACAACAAATGCAGCAATTAAATCAGGATTGCTTTATACAATGATTTCTGGGGCACTGAATAGCTTCAATTTAGTTGGAGGCACGAAAGTATCACTTGGAAATTATCTTGGAATAGCAGGGCATATTTTTAGCTTTAACGGGTTTATTTATTTTTCTTCAGGAGAAGTGGCGAAAAGATGGTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3de8f9a328fa1d9a9c34881a59d468c07caca16d00e7d7368b400cd5a1342028
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6279
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of an aquaculture associated phage FL-1 infecting Flavobacterium species Laanto,E., Ravantti,J. and Sundberg,L.-R. 2017-06-08 — GenBank