Protein

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Genbank accession
XYH42921.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
Protein sequence
MTTKVIFTFHSPDGSPQANEKFTVRLTRPGMSDAEHCVVIPETYEMVTDSKGEFTMDLESSTSAYRVTALGDEDEFEDDPCSQYTFTFYVPDSVDPVYVQELILMPPPNNLPWDEEAMNKIAQAVVDARNARDDAEESADRAEAQVGLAAEQVTLAKAEVTKATAQADRSKSEADRATIQATNAANSATAAANSATEANTQANRAKTEADRSKSEADRARDLADAVAEKVEGGSLPPLVGMNETFTYEGTDPYRWTVSGPATAVSDGSVMRLTKTDGSGSRAFLRQAVTFPDSHWIVYMRVKTQTGTAAQNRSAQIRFIAADNKDCVVYFNVNANGSVEPNTIHIQGTEGGTRNAATMFTGLGTEDWLDLAVKYDAVNRHIELFRRLPNGTWQKGGGRLMVDAIKPTFIEVSSMPVAPQNWWLDLDYISVCKPNLICYGDSIAAGQNEYGVTRGNNSYNNNRNWAGTWFGKVPLYATNRNNLVLVQGVEGRRTWQYLSQLSEISNSGVKVVFMHASTNDVNDATMTMAKRTSDTQAIIDQLHAVGAQVVLFNSMQGTQAYNDASSTTVKLRDYTDQWWNTELPKVNGLAQALDIARLIAKDGYMDPALGASDGLHLTSASAQKIADKLGQFFSNSSDTNGFASLDSPAFTGIPTVPTQTPFLPYGKAIANTEYVVTFIQDWTQRYGYGELTMDSRTGAQLSGPGVRSGYYHVPAGAGNPLPSGLNTTLAFVDHKSYDTNKGWQLWNPAYTGRLFIRTTNASGVWQTPVELTTFTWLDANNVTKPRTLKFMELPLFNPPGSPSLSGFVPIQDSADGGWRNLSATPTGVALLGASSAGGALNYLGGMPIANQTLPSNSIDNAASNGFYSVPVGTTSLPIGMGDTNGHTAITAVFDNATKYQLLFPRTGGAGSYATSVFYRARSNNGWESWVRLLASNQLEGSVTTEPLTTAIFQNNGNNTLNVGRSVRFADGTQIVYATIRLTYAAVDVLQYTYTYPMGFVAPPTVVVQPILGSRDDINGMPYLAVTSPFTYNVANGNALVQIYRVAGYTGHSFASTSFINCALIAVGRWK
Physico‐chemical
properties
protein length:1069 AA
molecular weight: 115769,57540 Da
isoelectric point:5,14407
aromaticity:0,09542
hydropathy:-0,29036

Domains

Domains [InterPro]
DC_0617
ATT
1–66
DC_0617 DC_2023
Coil
Unmapped
118–152
Coil IPR051532
Coil
Unmapped
195–222
Coil DC_0711
IPR036514
STR
426–637
IPR036514
SSF52266
STR
432–630
SSF52266
cd00229
ENZ
435–631
cd00229
IPR013830
ENZ
437–620
IPR013830
XYH42921.1
1 1069
Architecture
ATT
ATT
STR
ATT 1-66 | ATT 94-478 | STR 479-1068 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYH42921.1
1 1069
Domain Start End Length (AA) Confidence
N-terminal 1 236 236 0,9843
Central domain 237 481 246 0,5417
C-terminal 482 1069 587 0,6878
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-236
Central
237-481
C-terminal
482-1069

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_VL3
[NCBI] 		3436883 Viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYH42921.1 [NCBI]
Genbank nucleotide accession
PV764939.1 [NCBI]
CDS location
range 19265 -> 22474
strand -
CDS
ATGACTACCAAGGTGATCTTCACCTTCCACAGCCCGGATGGTAGCCCGCAGGCGAACGAGAAGTTCACCGTGCGGTTGACCCGTCCTGGTATGAGCGATGCAGAGCACTGCGTCGTAATCCCTGAAACCTATGAGATGGTGACCGACTCCAAGGGTGAGTTCACCATGGACTTGGAATCGTCTACCTCTGCCTACCGCGTCACCGCACTCGGTGATGAGGATGAGTTCGAGGACGATCCCTGCTCGCAGTACACCTTCACCTTCTACGTACCGGACTCTGTTGATCCGGTCTACGTACAAGAACTGATCCTCATGCCCCCGCCCAACAACTTGCCGTGGGACGAGGAAGCCATGAACAAGATCGCCCAAGCGGTGGTCGATGCTCGCAATGCACGAGACGATGCCGAAGAGTCGGCTGACCGTGCAGAGGCTCAGGTTGGTTTGGCCGCTGAGCAAGTGACCCTTGCAAAGGCAGAGGTGACTAAGGCTACCGCCCAGGCTGACCGCTCCAAGTCGGAAGCGGACCGAGCTACTATCCAAGCCACCAATGCAGCCAACTCGGCTACTGCTGCGGCTAACTCTGCCACCGAAGCCAACACGCAAGCCAACCGTGCGAAGACGGAAGCCGACCGCTCCAAGAGCGAGGCTGATCGGGCACGGGATCTGGCTGATGCCGTGGCTGAAAAGGTCGAGGGTGGCTCGCTGCCTCCGCTGGTGGGCATGAATGAGACCTTCACCTATGAAGGTACCGACCCTTACCGCTGGACCGTCTCTGGTCCTGCTACGGCTGTCTCGGATGGAAGTGTCATGCGCCTGACCAAGACCGATGGCAGTGGCTCTCGTGCTTTCCTGCGACAGGCAGTGACCTTCCCGGACAGCCACTGGATCGTCTACATGCGTGTGAAGACCCAGACCGGTACCGCCGCACAGAACCGGTCTGCCCAGATCCGGTTCATCGCTGCCGACAACAAGGACTGCGTGGTCTACTTCAACGTCAATGCGAATGGCTCGGTGGAACCTAACACCATCCACATTCAAGGCACCGAGGGTGGTACCCGTAACGCTGCCACCATGTTTACTGGTTTGGGTACCGAGGACTGGCTAGACCTCGCTGTGAAGTACGACGCAGTGAACCGCCACATCGAACTCTTCCGCCGCTTGCCCAATGGCACTTGGCAGAAGGGCGGTGGACGTCTGATGGTTGACGCTATCAAGCCGACCTTCATCGAAGTCTCGTCCATGCCTGTAGCACCGCAGAACTGGTGGCTGGATCTGGACTACATCTCGGTGTGCAAGCCCAACCTCATCTGCTACGGCGACAGCATCGCCGCAGGCCAGAACGAGTATGGGGTAACCCGTGGGAACAACTCCTACAACAACAACCGCAACTGGGCTGGTACCTGGTTCGGCAAGGTTCCGCTCTACGCCACCAACCGGAACAACCTGGTGCTTGTCCAGGGTGTGGAAGGCCGTCGTACCTGGCAGTACCTCAGCCAGCTGTCGGAGATCTCCAATTCCGGCGTGAAGGTAGTCTTCATGCATGCCAGCACGAATGACGTGAACGACGCCACCATGACCATGGCCAAGCGTACGTCGGATACCCAAGCCATCATCGACCAGCTTCATGCTGTCGGTGCTCAGGTGGTGCTGTTCAACTCCATGCAGGGTACCCAGGCGTACAACGATGCCTCGTCCACTACCGTCAAGCTGCGTGACTACACCGACCAGTGGTGGAACACCGAACTGCCCAAGGTCAATGGTTTGGCCCAGGCCCTGGACATCGCACGTCTCATCGCCAAGGACGGGTACATGGACCCGGCTCTTGGTGCGAGTGATGGACTGCACCTGACCAGTGCCTCGGCACAGAAGATCGCTGACAAGCTCGGCCAGTTCTTCTCCAACTCCAGTGATACCAATGGTTTCGCTTCGTTGGATAGCCCTGCCTTCACTGGCATTCCGACTGTCCCCACGCAGACTCCTTTCCTGCCCTACGGCAAGGCTATCGCCAACACCGAGTACGTGGTTACGTTCATCCAAGACTGGACTCAACGGTACGGCTACGGTGAACTCACCATGGATAGCCGGACTGGTGCTCAGCTGTCTGGTCCGGGTGTACGCAGTGGCTACTACCATGTCCCTGCCGGTGCGGGTAACCCCTTGCCTTCTGGCTTGAACACTACCCTGGCTTTCGTGGACCACAAGTCCTACGACACCAACAAGGGCTGGCAGCTGTGGAACCCGGCCTACACTGGCCGTCTGTTCATTCGTACTACGAATGCTTCAGGCGTCTGGCAGACTCCGGTAGAACTGACTACCTTCACTTGGTTGGATGCGAACAACGTCACCAAGCCACGAACCCTGAAGTTCATGGAACTGCCTCTGTTCAACCCGCCTGGCAGCCCATCTCTGTCTGGCTTCGTACCGATCCAGGACAGTGCAGACGGTGGCTGGCGTAACCTGTCTGCCACACCTACTGGTGTGGCTTTGCTGGGTGCTTCTTCAGCTGGTGGAGCGCTGAACTACCTGGGTGGTATGCCAATTGCAAACCAGACTCTTCCGAGCAACAGCATCGACAACGCAGCATCCAACGGCTTCTACTCTGTACCTGTCGGAACTACCAGTCTGCCTATTGGTATGGGTGATACCAACGGACACACTGCTATTACCGCAGTGTTCGACAACGCTACCAAGTACCAGCTGCTGTTCCCACGTACTGGTGGTGCTGGTTCCTACGCTACCTCTGTGTTCTACCGTGCTCGGTCGAACAACGGGTGGGAAAGCTGGGTGCGGTTGTTGGCTTCGAACCAACTGGAGGGTTCGGTAACCACTGAACCGCTGACTACCGCTATCTTCCAGAACAATGGCAACAACACCCTCAACGTGGGTCGGTCTGTACGTTTCGCTGACGGCACTCAGATCGTCTACGCAACGATACGGCTCACCTACGCTGCGGTGGATGTGTTGCAGTACACCTACACCTACCCGATGGGATTCGTAGCACCGCCTACTGTGGTAGTTCAACCTATCCTTGGATCTCGGGACGACATCAACGGTATGCCTTACCTGGCAGTTACCAGTCCGTTCACCTACAACGTAGCGAACGGCAATGCTCTCGTGCAGATCTACCGGGTTGCTGGGTATACTGGACACAGCTTCGCCAGTACTTCATTCATTAACTGCGCACTGATCGCAGTAGGACGGTGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
46da106d79b75b200f2436a9cf4118fc2872442c6dd9dd836b639214621b04e9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7797
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50