Protein

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Genbank accession
YP_009853064.1 [GenBank]
Protein name
straight fibre tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MISNNAPAKMVLNSIMTGYTLAYVQHSIYTDYDVIGRSFWLKIGESIDRRDYTGIDTFFVMINNLTPSTTYQVQGAFYDSIIDSELLNAKIGINLSNETNFRTKEKPIITAARSESEPVDVGVGAPIVVVETTGEASYCTIELKSTASEDSEWVKYYIGALGPTIKFGGVPVGDYKIRISGQVTMPDGVTVDSSGYYEYPSVFTVAYNFVPPTAPTNIAFKAARIADGKERYDVRIEWDWERGAGANVREFLVTYINSEEYAKTGWDKAQKINVGAARAATIISFPWKVEHTFKVSSIAWGPNKQDITESAPVTFILNEDTPLDNSFVNETGIDVNYAFIKGSMKDGEIWRQTFLIDAATGAINIGLLDEEGKAPISFDPINRVVNVDGKVITRDINAANFIMTNLSGKDNPAIYTQGKSWGDNNSGIWMGMDNTSAKAKLDIGNATQWIRYDGTTLRISSGVVIGTPNGDVDIETGLQGKQTVFVYKLATSLPAKPLEQDYPPPGWSKTPPNRTDMTQNIYATTGTLDPVTNRLLEGTSWSDVVQWSGTEGTIGHDGQRGPGMYSVGIAGLGDWDDGQANSFFQSNFGSPPVKYDVLTEFNSNAPQSAFTRQWNGSGWVNPAMVLHGNMIVNGTVTADKIVAGNAFLSQIGVNIIYDRNAALSGNPEAYYKMKIDLNSGYIHIR
Physico‐chemical
properties
protein length:685 AA
molecular weight: 74944,05180 Da
isoelectric point:4,83844
aromaticity:0,10511
hydropathy:-0,25489

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
103–197
IPR057551
YP_009853064.1
1 685
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-335 | STR 350-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009853064.1
1 685
Domain Start End Length (AA) Confidence
N-terminal 1 408 408 0,8587
Central domain 409 640 233 0,1423
C-terminal 641 685 44 0,7490
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-408
Central
409-640
C-terminal
641-685

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage VEc33
[NCBI] 		2847072 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus VEc33
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009853064.1 [NCBI]
Genbank nucleotide accession
NC_048818 [NCBI]
CDS location
range 84691 -> 86748
strand -
CDS
ATGATTTCAAATAATGCACCAGCCAAAATGGTCTTAAATAGTATAATGACTGGATATACTTTGGCTTATGTCCAGCACTCCATTTATACTGATTATGATGTTATTGGTAGATCTTTTTGGTTAAAAATAGGAGAAAGTATAGATAGACGTGATTATACCGGTATAGATACTTTCTTCGTAATGATTAATAATTTAACCCCCTCAACCACCTACCAGGTTCAGGGGGCTTTCTATGATTCAATTATCGACTCAGAACTTTTAAATGCAAAAATTGGTATAAACCTCTCTAATGAAACTAACTTTAGAACAAAGGAAAAGCCAATAATTACTGCAGCAAGATCTGAATCAGAACCCGTTGACGTTGGTGTTGGTGCTCCAATAGTTGTTGTAGAGACTACTGGTGAAGCTAGTTACTGCACTATTGAATTAAAAAGTACTGCATCAGAAGATAGTGAATGGGTTAAATACTATATAGGCGCGCTGGGACCTACTATCAAATTTGGTGGTGTTCCCGTTGGCGACTATAAGATCAGAATATCTGGTCAAGTTACGATGCCAGATGGTGTTACAGTTGACTCATCTGGTTATTATGAATATCCTAGCGTTTTCACTGTAGCTTATAATTTTGTACCACCTACTGCACCTACTAACATTGCCTTTAAAGCTGCACGAATTGCAGATGGTAAGGAACGATATGATGTCAGAATAGAGTGGGACTGGGAACGTGGTGCGGGTGCTAATGTCCGTGAATTTCTGGTTACTTATATAAACTCTGAAGAATACGCTAAGACTGGCTGGGATAAAGCTCAAAAGATAAACGTTGGGGCTGCTAGAGCTGCAACGATTATATCATTCCCATGGAAAGTTGAGCATACTTTTAAGGTATCATCAATTGCCTGGGGACCAAATAAGCAAGATATAACAGAATCAGCTCCTGTAACATTTATATTGAATGAAGATACTCCTCTAGACAATAGCTTTGTCAATGAGACAGGTATTGACGTTAATTATGCCTTTATTAAGGGTAGCATGAAAGATGGAGAAATCTGGAGACAGACATTCTTAATCGACGCAGCTACTGGTGCTATTAACATTGGTCTACTGGATGAAGAAGGAAAAGCACCTATTTCTTTCGACCCTATAAACCGTGTTGTTAACGTTGATGGTAAAGTAATTACTAGAGATATTAATGCTGCGAACTTTATCATGACTAACTTATCTGGTAAGGATAACCCAGCAATTTACACTCAAGGTAAATCTTGGGGGGATAATAACTCCGGTATTTGGATGGGTATGGATAATACCTCTGCCAAAGCTAAATTAGACATTGGTAACGCTACACAATGGATACGTTATGATGGTACTACCTTGCGTATCTCTAGTGGTGTAGTAATTGGGACACCAAATGGTGACGTAGATATTGAAACTGGTTTACAAGGTAAACAGACAGTATTTGTTTATAAGTTAGCAACATCTCTACCTGCTAAACCACTAGAACAAGATTATCCACCTCCTGGTTGGTCAAAAACTCCACCTAACCGTACAGATATGACACAAAATATCTATGCGACTACGGGTACACTTGATCCAGTTACTAATAGGTTATTAGAGGGTACTAGCTGGTCAGATGTGGTTCAGTGGAGTGGTACTGAAGGTACTATAGGGCATGATGGACAACGTGGTCCTGGGATGTACTCTGTAGGTATAGCAGGTTTAGGTGATTGGGATGATGGACAAGCTAATTCCTTCTTTCAAAGTAACTTCGGTTCTCCCCCAGTTAAATATGATGTATTAACTGAATTTAACAGTAATGCCCCACAATCAGCATTTACAAGGCAATGGAACGGGTCTGGTTGGGTTAACCCTGCAATGGTTCTCCACGGAAACATGATTGTTAACGGGACGGTGACGGCAGATAAAATTGTAGCAGGAAATGCTTTCTTATCTCAGATCGGTGTTAACATCATTTATGATAGGAACGCTGCGTTATCAGGAAATCCTGAGGCATACTACAAGATGAAGATAGACCTAAATAGTGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ba27c07b0eaae81f601875e35c174bf4ee887aa5a1b5f04d412b6aab4b3239d6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7902
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Escherichia coli bacteriophage VEc33 Denisenko,E., Kislichkina,A., Krasilnikova,V., Verevkin,V. and Volozhantsev,N. 2025 — GenBank