Protein

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Genbank accession
AXH70905.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAEYTVVDLAAAKSQNANDGDLIKVESNNNVYVVRSPLDAPSKGIVNDAGKVLVWNSNHTIEDSFEEIDAVKNSSSGLAPWSDSETYDTGDVVYHQNRVLECNADGITGNFNSDNWNVLVGPVYGANGNRFTGVKSIIVEFEQFPSGDSGSYFGIKYLELRDYNGTLVNPSAVSSSSTSHDMHNNTNYYPEAIMLSSMHQDGSTERALWVSGVAGENRKTTRICFVLSSPIDIHTMKIRTSTSAGQCPAKVRVYGSAINPRSAGLVDFIREPWLKLMGGYDFIDNDTPASNTEIDLVMESGVNSLPRYRSREVDVWSMHKTDSPNRGGGDHIMASSVGYLERGKKIAAAFWLTSHGRNGDLSSFSMMNDTNADGTYETVYGALQSGLEPTADYRFLTSGITPGSVNVNSNMGRVLDLRDKNIIVPNFDVYGLISHQDHNGTFSNNSAYGPDATHNTIPGHQDASYYSNQDDWVQGVSRATTNSFGTSAFISFLYED
Physico‐chemical
properties
protein length:496 AA
molecular weight: 54160,82800 Da
isoelectric point:4,87721
aromaticity:0,09476
hydropathy:-0,43468

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH70905.1
1 496
Domain Start End Length (AA) Confidence
N-terminal 1 240 240 0,3347
Central domain 241 439 200 0,1754
C-terminal 440 496 56 0,9891
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-240
Central
241-439
C-terminal
440-496

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage BONAISHI
[NCBI] 		2283011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio coralliilyticus
[NCBI] 		190893 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH70905.1 [NCBI]
Genbank nucleotide accession
MH595538 [NCBI]
CDS location
range 172857 -> 174347
strand +
CDS
ATGGCAGAATATACAGTAGTAGATTTAGCAGCAGCTAAATCACAGAATGCTAATGATGGAGACCTCATAAAGGTTGAGTCTAATAACAACGTTTATGTTGTTAGGAGTCCCTTAGATGCACCATCAAAAGGCATCGTCAATGACGCAGGCAAAGTACTAGTTTGGAATTCCAATCATACGATAGAAGACTCGTTTGAAGAAATTGATGCCGTTAAGAACTCAAGCTCTGGACTTGCGCCTTGGAGTGATAGCGAGACTTACGATACTGGTGATGTTGTCTATCATCAAAACAGGGTGCTTGAATGTAATGCCGATGGAATTACAGGTAACTTTAATTCTGATAATTGGAATGTTCTAGTAGGACCTGTATATGGAGCAAATGGAAATAGGTTCACTGGGGTTAAATCAATCATTGTCGAATTTGAACAATTTCCTTCGGGTGATTCAGGGAGTTATTTCGGAATTAAGTATTTAGAATTAAGGGATTACAACGGCACTTTGGTTAATCCATCTGCGGTATCAAGTTCGAGCACAAGCCATGACATGCATAATAATACGAACTATTATCCTGAAGCTATCATGCTTAGCAGCATGCATCAGGATGGCAGTACAGAAAGAGCATTATGGGTGTCCGGTGTTGCGGGAGAAAATAGAAAAACCACGAGAATATGTTTTGTACTCAGTTCACCCATTGACATCCATACGATGAAAATACGCACCAGTACCAGTGCAGGCCAATGTCCGGCTAAAGTTAGGGTATATGGCAGTGCTATCAATCCTCGATCAGCAGGATTAGTGGATTTCATAAGAGAACCATGGCTCAAGTTAATGGGCGGCTATGACTTTATTGATAATGATACTCCGGCAAGTAATACTGAAATAGATTTAGTGATGGAGAGTGGAGTTAATTCCTTGCCTCGATATAGAAGCAGGGAGGTAGATGTATGGTCAATGCATAAAACGGATAGTCCTAACCGAGGAGGAGGTGACCACATCATGGCTTCTTCTGTCGGATATCTAGAAAGAGGTAAAAAAATAGCTGCCGCATTTTGGTTAACAAGCCACGGAAGAAATGGAGATCTTTCCTCTTTCAGCATGATGAATGATACTAATGCAGATGGTACTTACGAAACTGTCTATGGTGCTTTGCAGTCTGGCCTAGAACCAACCGCTGATTACCGATTCTTAACCAGTGGAATAACTCCCGGAAGCGTAAACGTTAATTCTAACATGGGTAGGGTTCTAGATCTCAGGGACAAAAATATTATTGTTCCTAATTTCGACGTATATGGACTTATCAGCCACCAGGACCATAATGGAACATTCAGCAATAACAGTGCATATGGTCCAGATGCGACCCATAATACAATACCTGGGCATCAAGATGCGAGTTACTATAGTAATCAGGACGATTGGGTGCAAGGAGTTTCTCGAGCTACAACAAACAGCTTCGGAACTAGTGCATTCATATCATTCCTATATGAGGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
59667e612770d0b52a3771d6edb0be2c3ce5eb3fd2f290c28ebb4145a1edd3bd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5056
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Therapeutic potential of a new jumbo phage that infects the coral pathogen Vibrio coralliilyticus Jacquemot,L., Bettarel,Y., Monjol,J., Corre,E., Halary,S., Desnues,C., Bouvier,T., Ferrier-Pages,C., Van Ngoc,B. and Baudoux,A.-C. 2018-10-24 — GenBank