Protein

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Genbank accession
YP_009818289.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,67
Protein sequence
MPLYTQSIKNLKGGISQQPDILRFSDQGEQQINGWSSESDGLQKRPPTVWKKRLAAVNETIPNNAKFHLINRDENEQYYIVFTGKEIMVFDLEGNQYTVSGVTDYVNTSKPRDDIRVITVADYTFVVNRRTVVAQGTTKANPTYNMKNRALINLRGGQYGRLLKVGINGGTKVEHQLPPGDNAKDDPPKVDAQAIGKALVDLLVVAYPNYTFTLGSGYIEIKAPAGTDINSVETEDGYANQLINAVLDTVQTISKLPLAAPEGYIIRIQGETNSSADEYFVKYDSAKKTWRETVEPGTVTGFDASTMPHALVRQADGNFTFQTLDWTERGAGNDETNPMPSFVNSTINDVFFYRNRLGFLSGENVIMSRSAGYFAFFPKSVATLSDDDPIDVAVSHPRISILKYAVPFAEQLLLWSDEVQFVMTSSGVLTAKSIQLDVGSEFAVSDNARPFAIGRSVFFAAPRGSFTSINRYFAVADVTDVKDADDTTGHVLSYIPNGVFDIQGSSTENFITVSTEGAPNKLFIYKFLFKDGVQLQASWSHWELEQGEQIMASACIGSAMYIVRKHGYGVDLEKLEFIKEAVDIGGEPYRLHLDGKTTMVIPTDAFNPDTYTSSFDVGAAYGGVFPPAGKYVMVDSSGRFVQLPDTVWSSTRWVTVKGDWSGKTVFLGRVYKFTYAFSRFLIKYEDQNGTVTEDSGRLQLRRAWVNYQHTGAMVMRVVNHHREFLNTLNGYKLGLQDIGRVDIGDGQFRFPMNGDALHTRLILESDYPTPLSIVGCGWEASYARKAKAI
Physico‐chemical
properties
protein length:789 AA
molecular weight: 87553,47650 Da
isoelectric point:5,55177
aromaticity:0,11153
hydropathy:-0,26958

Domains

Domains [InterPro]
IPR058003
TTP
1–789
IPR058003
YP_009818289.1
1 789
Architecture
TTP
TTP 1-789
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009818289.1
1 789
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9905
Central domain 142 346 206 0,1115
C-terminal 347 789 442 0,2128
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-346
C-terminal
347-789

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Ro45lw
[NCBI] 		2498616 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Kayfunavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009818289.1 [NCBI]
Genbank nucleotide accession
NC_048136 [NCBI]
CDS location
range 23042 -> 25411
strand +
CDS
ATGCCGTTATACACACAAAGCATAAAAAATCTTAAGGGGGGCATTAGCCAACAGCCGGACATCCTGAGGTTCTCAGACCAAGGTGAGCAGCAGATTAACGGCTGGTCATCCGAGAGTGACGGGCTACAGAAGCGACCACCTACCGTCTGGAAGAAGAGGCTGGCGGCGGTGAACGAGACCATCCCGAACAACGCTAAGTTCCATCTGATTAACAGGGACGAGAACGAGCAGTATTATATCGTCTTCACAGGAAAGGAAATCATGGTCTTTGACCTTGAGGGGAACCAGTACACTGTTTCAGGTGTAACGGACTACGTGAACACTTCCAAGCCGCGTGACGACATCCGGGTCATTACAGTAGCTGACTACACGTTCGTAGTGAATCGCCGAACTGTGGTGGCTCAGGGGACAACTAAGGCAAACCCTACCTACAATATGAAGAACCGAGCTTTGATTAACCTTCGTGGTGGTCAGTATGGTAGATTGCTGAAGGTAGGAATTAATGGCGGGACAAAGGTTGAGCACCAGCTTCCTCCGGGAGATAACGCCAAAGATGACCCACCTAAAGTCGACGCTCAGGCTATCGGCAAGGCGTTGGTGGACCTGCTTGTGGTGGCCTATCCAAACTACACGTTCACCCTTGGGTCTGGCTACATCGAGATTAAAGCCCCAGCAGGGACCGACATCAACTCGGTGGAGACTGAGGATGGCTATGCCAACCAGCTCATCAATGCGGTACTTGATACTGTGCAGACTATCAGTAAGCTCCCTCTGGCAGCGCCTGAAGGATACATCATCCGCATTCAGGGTGAGACTAACAGCTCAGCAGATGAGTATTTCGTGAAGTATGACTCTGCGAAGAAGACTTGGCGCGAGACTGTTGAGCCTGGGACTGTAACGGGATTCGACGCATCAACCATGCCACACGCTCTGGTCAGACAGGCAGACGGGAACTTTACGTTCCAGACCCTAGACTGGACTGAGCGTGGCGCTGGTAACGATGAGACCAACCCGATGCCTAGCTTCGTGAACTCTACGATTAACGATGTGTTCTTCTATCGTAACCGCTTAGGGTTCCTCTCCGGCGAGAACGTCATTATGTCCCGGTCTGCTGGATACTTTGCATTCTTCCCTAAGAGCGTGGCGACCCTCAGTGATGATGACCCGATTGACGTAGCTGTGAGTCATCCTCGAATCTCCATCCTGAAGTATGCTGTACCGTTCGCAGAACAGCTACTACTGTGGTCTGATGAGGTGCAGTTCGTGATGACCAGCTCCGGGGTTCTGACCGCCAAGTCCATCCAACTTGATGTAGGCTCTGAGTTCGCTGTTAGTGATAATGCTCGACCGTTTGCCATTGGACGTTCAGTCTTCTTCGCTGCTCCTCGCGGCTCGTTCACCAGCATTAACCGTTACTTTGCGGTGGCTGATGTCACAGACGTGAAGGACGCGGACGATACGACCGGGCATGTGCTGTCTTACATTCCTAACGGAGTATTCGACATCCAAGGGTCCTCTACTGAGAACTTCATCACCGTGTCTACTGAAGGCGCTCCGAACAAGCTGTTCATCTACAAGTTCCTCTTCAAGGATGGCGTACAGCTTCAAGCCTCGTGGTCGCACTGGGAGTTGGAGCAAGGGGAGCAGATTATGGCCTCAGCCTGTATAGGGTCCGCTATGTACATAGTACGTAAGCATGGCTACGGAGTTGACTTGGAAAAGCTGGAGTTCATCAAGGAGGCTGTTGACATCGGAGGGGAACCATACCGCCTCCATCTTGACGGTAAAACCACTATGGTCATCCCGACTGACGCGTTCAACCCTGACACGTACACCTCTTCCTTCGACGTTGGTGCGGCCTATGGTGGTGTTTTCCCTCCAGCAGGTAAGTATGTCATGGTCGACTCCAGTGGGCGCTTCGTGCAGCTGCCGGATACCGTATGGTCCAGCACTCGGTGGGTGACTGTTAAGGGAGACTGGTCAGGTAAGACCGTGTTCCTCGGTCGCGTCTATAAGTTCACCTACGCCTTCTCTCGGTTCCTCATTAAGTATGAAGACCAGAACGGGACGGTGACTGAAGACTCAGGTCGACTACAGCTTCGCCGCGCTTGGGTGAATTATCAGCACACTGGCGCGATGGTGATGCGTGTAGTCAACCATCACCGTGAGTTCCTGAACACGCTGAACGGCTACAAGCTGGGCCTACAGGACATCGGTCGGGTCGACATCGGTGACGGTCAGTTTAGGTTTCCAATGAACGGAGATGCTCTGCACACTCGGCTAATCCTTGAGTCAGACTATCCGACCCCATTGTCCATCGTCGGTTGCGGCTGGGAGGCTTCATACGCCCGTAAAGCCAAAGCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
79542b36066262175d624d456f70f5c9e732143a65fee3ba1a196656ebadb418
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8991
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Escherichia Phage vB_EcoP-Ro45lw Isolated from the composting of food scraps and yard trimmings Liao,Y.-T., Liu,F. and Wu,V.C. 2019-02-28 — GenBank