Protein

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Genbank accession
XTJ53614.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSIKDNLESKTFQEIGGIITENHHDEQTRDIKLIAESLSNPDELKTYLTSDAGVEPITGVADGNYFNVRSSSDELYTDEYQNVNGSAIATGKRCLSALGVQIQDKLASTIKDVSGKDQQEINDENKNSLFRVNGKAIGIVPFLDISSALSGFLNSKDVQEIYLDGEYLLNSQIVVEAGATPKKIFCSDSTILKPAVAGSLPLFDLYSSVEFHNATFDYQNGNCFTTLRYRPNCGLVKLRDIKIKNIKDMVSSYGTIIFFISTEGNKLDIDGVSFENCLKLGNGSITDSAGSLNGIYYYGNTGLVRGEIKNIYAKEFHNINASSQIIIEDTAVVYPATAGAYTPLTIENVIGDEFGKRLVKAQSSGITFRNIRGTSTTGDSLSVLGILSEVGQFTSNNNIVSGVYARGNMDYGYADSGVNTQVDNLDIDLYGSNALNDGNLHFGAYLASQARKNTISNSKIKARRPIGINPSLIGEPIEDLNLDNVDLELTDAGNVFIDIPGNASLTNGAIKRLTAKLTLRTSTTRTKGAQLMSTFDAQKNYSDFDLDVKFVDKSSASWKAVLGGFHYIKNLTLRAKFISEGGLAPDQIGDLATISNSSNVFVHVESEQKFNRGIIATANNGFKVSKDFKIGSATIGQIVATGAGTKYEVPDHIALFNGLTSVNEVLRGFGSTAQRPANATIGFPYFDTTLGKIVNLKSVNPNVWVDATGVTV
Physico‐chemical
properties
protein length:712 AA
molecular weight: 76891,23700 Da
isoelectric point:5,24035
aromaticity:0,08287
hydropathy:-0,18104

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XTJ53614.1
1 712
Domain Start End Length (AA) Confidence
N-terminal 1 147 147 0,9946
Central domain 148 648 502 0,9836
C-terminal 649 712 63 0,9415
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-147
Central
148-648
C-terminal
649-712

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage Ab1-TPeters
[NCBI] 		3405109 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XTJ53614.1 [NCBI]
Genbank nucleotide accession
PP763253.1 [NCBI]
CDS location
range 26974 -> 29112
strand +
CDS
ATGAGCATTAAAGATAATTTAGAATCAAAAACGTTCCAAGAAATTGGTGGAATTATTACAGAAAACCACCATGATGAGCAAACACGTGATATCAAATTGATTGCAGAATCATTGAGTAATCCAGATGAATTAAAAACTTATCTAACCTCTGATGCTGGTGTTGAGCCTATAACAGGCGTTGCTGATGGTAACTATTTCAATGTTCGCTCATCTAGTGATGAGCTATATACTGATGAGTATCAGAATGTTAACGGTAGTGCTATTGCGACTGGTAAGCGGTGTTTGAGTGCATTAGGGGTGCAGATCCAAGATAAGCTAGCAAGCACTATCAAAGATGTGAGTGGAAAGGATCAACAAGAGATTAATGATGAAAATAAAAATAGTCTATTCCGCGTGAATGGAAAAGCAATTGGTATTGTTCCGTTTCTGGATATTTCATCTGCCCTGTCTGGATTTTTAAATAGCAAAGATGTGCAAGAAATCTATCTAGACGGTGAATATCTACTGAACTCTCAAATTGTTGTGGAAGCTGGAGCAACACCTAAAAAGATTTTCTGTTCTGACAGCACAATATTGAAGCCAGCAGTTGCTGGAAGTTTGCCGTTATTTGATCTTTATTCATCGGTTGAATTTCATAACGCAACTTTTGACTACCAAAATGGCAATTGCTTTACGACTCTGAGATACCGACCGAACTGTGGCCTTGTTAAACTTAGAGATATTAAGATAAAAAATATTAAAGACATGGTTAGTTCCTACGGAACAATCATTTTCTTTATTTCGACGGAGGGCAATAAACTAGATATTGATGGCGTTTCATTTGAGAATTGTCTAAAATTAGGTAATGGCAGTATTACTGATAGTGCCGGATCATTGAACGGGATCTATTATTACGGGAATACTGGGTTGGTGCGAGGTGAAATTAAGAATATCTATGCCAAAGAATTTCACAATATCAATGCTTCATCTCAAATTATTATCGAAGATACGGCAGTAGTTTATCCTGCTACCGCAGGAGCATACACTCCTCTGACTATTGAAAACGTGATTGGTGATGAATTTGGAAAGCGACTAGTAAAGGCTCAATCATCAGGCATTACTTTTAGAAATATTCGCGGCACATCAACAACAGGGGACTCACTATCTGTTCTTGGTATTCTGTCAGAGGTTGGTCAGTTTACATCAAACAATAATATTGTTTCTGGTGTGTATGCGCGCGGGAATATGGATTATGGATATGCAGATTCTGGGGTTAATACACAGGTCGATAACCTCGATATTGATTTATATGGATCAAATGCGCTAAATGATGGAAATCTGCACTTTGGCGCATATCTCGCATCACAGGCAAGGAAAAACACTATCTCTAATTCAAAAATCAAAGCTCGTAGACCTATAGGGATTAATCCATCGCTGATAGGAGAGCCCATTGAAGATTTGAACCTTGATAATGTTGATCTTGAACTGACTGATGCTGGAAATGTGTTTATCGACATTCCTGGAAATGCTTCTTTAACAAACGGTGCAATTAAGCGATTGACAGCAAAACTGACACTAAGAACATCAACAACAAGAACAAAGGGCGCACAACTTATGAGCACATTTGATGCTCAAAAGAACTACAGCGATTTTGACCTTGATGTTAAGTTTGTTGATAAATCTAGTGCTTCATGGAAAGCAGTTCTTGGTGGCTTTCACTATATTAAGAACTTAACATTAAGAGCTAAGTTTATTTCAGAAGGTGGCTTGGCTCCAGATCAAATTGGTGACTTAGCAACAATCAGTAACTCGTCTAACGTATTTGTGCATGTTGAGAGCGAGCAGAAGTTCAACCGTGGAATCATTGCTACAGCGAATAACGGTTTTAAAGTTTCAAAAGACTTTAAAATCGGATCAGCCACTATTGGTCAAATTGTAGCGACTGGCGCAGGAACAAAGTACGAAGTACCAGATCATATTGCTCTATTTAACGGATTAACCTCTGTTAATGAGGTTCTTCGTGGTTTCGGTTCTACGGCACAACGACCTGCAAACGCAACGATCGGTTTTCCATATTTTGACACAACTCTCGGTAAGATTGTAAATCTTAAAAGTGTAAACCCTAACGTGTGGGTGGATGCCACAGGTGTTACCGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9242563bf8ec3f8e5c9e2f8179eacbf45d65b2e30caeb55b20cbbadebac96122
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7727
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Bacteriophages Active Against Multi-Drug Resistant Acinetobacter baumannii Mzhavia,N., Margulieux,K.R., Peters,T.L., Tong,M., Savoie,M.E., Burke,K.A., Ellison,D.W., Nikolich,M.P. and Filippov,A.A. 2023-09-19 — GenBank