Protein

UniProt accession
Q9FZW3 [UniProt]
Protein name
Neck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MHRPPFNKLRTIDNLSAYKYHIDYLPTAMDESLTLLQKVNMLIYNVNQTNAITNDLAERWNEIIEWLNTEAISKEVEKILEKWLSDGTLADIITDAVLGDIEKIKLALAEFEQLKKDFDKLRYDVDSITQTSGNAIYQKLIMRPFFGTETEQIFSGAENAPQGMAYVEFKGKKYIFILSRVEGTTWTKAERHRITQFELTEDGSLTQPLTFTKPLELGHQGLSAMVDNDKIWLFAGYGYGDFENNGKGYTKIEWKGSNTDECDIYRYRLLGAHGSNERYNEYNHATPTISTDGRFIVLAVATTFEANTRYMLIFDRKQVERAENPMSVPALNIFQIYAAPYVGSHIVQDVACDGNYVYIYTSDVAPLGVKIITIMSMQGFVVGYYKVDGGLALYDSLTGDPRYGDAVQMEAEGLTIMGSDLLLLSTDVWQKDGQYTKRDKLVYKVYRGCATCEGEPINQGIQPLTSPASVHIRGTVHDVSFPYGDGFTVSQWDEQNNEIYPSLSYNGQSIFRIYDTRPDSNNELPMTLRNNKAPSGGWVEIRSGSTLEDGAGINMYNVTNSALGGRMRLYVTDPVTLESVYFQIYQNGAIVPSTDNLQNMGQXSNRMRNIYAGTGAINTSDERHKTDIAPISDKVLDAWEKVKFYQYKFKDAVDEKGEEARYHFGVIAQQIVKVFEDEGLSAFDYGLVGYDEWEATEDEYDSEGNLVEKGREAGNIYSIRPTECQWLEMACMRRKLERLS
Physico‐chemical
properties
protein length:740 AA
molecular weight: 83752,07830 Da
isoelectric point:4,86919
aromaticity:0,11096
hydropathy:-0,43315

Domains

Domains [InterPro]
IPR044914
541–619
IPR044914 IPR030392
IPR036388
620–740
IPR036388
G3DSA:1.10.10.10:FF:001786
620–740
G3DSA:1.10.10.10:FF:001786
cd10144
620–735
cd10144
IPR030392
620–680
IPR030392
Q9FZW3
1 740
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage GA-1
[NCBI] 		2679898 Uroviricota > Caudoviricetes > Salasmaviridae > Gaunavirus > Gaunavirus GA1
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAC21533.1 [NCBI]
Genbank nucleotide accession
X96987 [NCBI]
CDS location
range 12157 -> 14379
strand +
CDS
ATGCATAGACCGCCATTCAATAAGTTAAGAACAATTGACAACCTGTCTGCTTATAAGTATCACATTGATTACTTGCCTACAGCGATGGATGAGTCACTAACGTTACTTCAAAAAGTTAACATGTTAATTTATAACGTTAACCAAACAAATGCCATTACAAATGATTTAGCAGAACGTTGGAACGAAATTATCGAGTGGCTCAACACAGAAGCAATCAGCAAAGAAGTTGAGAAAATTCTTGAAAAATGGTTATCTGATGGAACGTTAGCAGATATCATTACTGATGCTGTTCTTGGCGACATCGAGAAAATTAAATTAGCTTTAGCAGAATTTGAGCAACTTAAAAAAGACTTTGATAAATTACGTTATGATGTTGATTCTATCACACAAACATCTGGAAACGCAATCTATCAAAAACTAATCATGCGTCCATTCTTTGGGACTGAAACAGAACAAATTTTTAGTGGTGCTGAAAATGCTCCACAAGGTATGGCTTATGTTGAGTTTAAGGGTAAAAAATACATTTTCATTCTGTCAAGAGTTGAGGGTACAACTTGGACTAAAGCAGAAAGACACCGTATTACTCAATTTGAGTTAACCGAAGATGGTAGTTTAACGCAACCACTAACATTTACTAAACCATTAGAGCTTGGACACCAAGGTTTATCTGCCATGGTAGATAATGATAAAATATGGTTATTTGCAGGTTATGGTTATGGTGACTTTGAAAACAACGGTAAGGGTTACACAAAGATCGAGTGGAAAGGTTCAAACACAGACGAGTGTGACATTTATCGTTATAGACTTCTAGGTGCTCATGGAAGCAATGAAAGATATAATGAATACAATCACGCAACACCTACTATTTCTACAGATGGTAGATTCATTGTACTAGCTGTTGCAACAACTTTTGAAGCTAATACTCGCTATATGTTGATCTTTGATAGAAAGCAAGTTGAACGAGCTGAAAACCCTATGTCTGTCCCTGCTTTAAACATTTTCCAAATCTACGCCGCACCTTACGTCGGTTCGCATATTGTTCAGGATGTAGCGTGTGATGGGAACTATGTATATATTTATACATCTGATGTAGCACCACTTGGAGTGAAAATTATCACCATTATGTCAATGCAGGGATTCGTTGTGGGTTACTATAAAGTTGACGGAGGTTTAGCACTATACGACTCCCTAACAGGCGACCCTCGTTATGGTGACGCCGTTCAAATGGAAGCAGAAGGTCTTACGATCATGGGTAGTGATTTACTGTTACTATCTACAGATGTTTGGCAGAAAGATGGACAATACACTAAAAGGGATAAGCTAGTTTATAAAGTGTATAGAGGTTGTGCTACATGTGAAGGTGAACCTATAAACCAAGGTATTCAGCCTTTGACTTCCCCTGCTAGTGTTCACATCAGGGGTACAGTTCATGATGTGTCATTCCCTTATGGTGATGGTTTCACTGTTTCACAGTGGGATGAACAAAATAACGAAATCTACCCTTCACTTTCTTATAACGGTCAATCCATTTTTAGGATTTATGACACACGTCCTGACTCTAATAATGAGTTACCTATGACTTTAAGAAACAACAAAGCACCTAGTGGTGGTTGGGTTGAAATTAGGAGTGGTTCTACTCTAGAAGATGGTGCAGGTATCAACATGTACAACGTAACAAATAGTGCGCTTGGCGGTAGAATGAGGCTCTATGTAACAGACCCTGTTACACTTGAATCTGTTTACTTTCAAATCTATCAAAATGGTGCTATTGTTCCAAGTACAGACAACTTACAAAACATGGGACAAKCTTCTAATAGAATGCGAAATATTTATGCGGGTACGGGTGCTATTAACACATCTGACGAGAGACATAAAACGGACATAGCCCCTATTTCTGATAAAGTATTAGACGCTTGGGAAAAGGTTAAATTCTACCAATACAAGTTTAAGGATGCTGTTGATGAAAAAGGCGAAGAAGCTAGATATCATTTTGGGGTTATCGCTCAACAGATTGTAAAGGTATTTGAAGATGAAGGACTAAGTGCTTTTGACTATGGACTCGTCGGTTACGATGAGTGGGAAGCAACAGAAGATGAATACGACAGCGAAGGTAACTTAGTTGAGAAGGGTAGAGAAGCAGGCAACATCTACAGCATAAGACCTACCGAATGTCAATGGTTAGAAATGGCATGCATGAGAAGGAAGCTTGAAAGGTTGAGTTAG

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0042802 identical protein binding Molecular Function IPI:IntAct (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3GUD
PDB
Source PDB
Method X-ray
Resolution 1,0000
Evidence 1,0000
View on RCSB Download PDB

Literature

Title Authors Date PMID Source
Functional characterization of the genes coding for the terminal protein and DNA polymerase from bacteriophage GA-1. Evidence for a sliding-back mechanism during protein-primed GA-1 DNA replication. Illana B, Blanco L, Salas M 1996-12-06 8969297 PubMed
Activation of replication origins in phi29-related phages requires the recognition of initiation proteins to specific nucleoprotein complexes. Freire R, Serrano M, Salas M, Hermoso JM 1996-11-29 8940089 PubMed
Crystal structure of an intramolecular chaperone mediating triple-beta-helix folding. Schulz EC, Dickmanns A, Urlaub H, Schmitt A, Mühlenhoff M, Stummeyer K, Schwarzer D, Gerardy-Schahn R, Ficner R 2010-02 20118935 PubMed
Differential functional behavior of viral phi29, Nf and GA-1 SSB proteins. Gascón I, Lázaro JM, Salas M 2000-05-15 10773070 PubMed
The switch from early to late transcription in phage GA-1: characterization of the regulatory protein p4G. Horcajadas JA, Monsalve M, Rojo F, Salas M 1999-07-30 10438592 PubMed
Crystal structure of an intramolecular chaperone mediating triple–β-helix folding Eike C Schulz, Achim Dickmanns, Henning Urlaub, Andreas Schmitt, Martina Mühlenhoff, Katharina Stummeyer, David Schwarzer, Rita Gerardy-Schahn, Ralf Ficner 2010-01-31 10.1038/nsmb.1746 DOI
Differential functional behavior of viral phi29, Nf and GA-1 SSB proteins I. Gascon 2000-05-15 10.1093/nar/28.10.2034 DOI
Activation of Replication Origins in ϕ29-related Phages Requires the Recognition of Initiation Proteins to Specific Nucleoprotein Complexes Raimundo Freire, Manuel Serrano, Margarita Salas, José M. Hermoso 1996-11 10.1074/jbc.271.48.31000 DOI
The switch from early to late transcription in phage GA-1: characterization of the regulatory protein p4G José Antonio Horcajadas, Marı́a Monsalve, Fernando Rojo, Margarita Salas 1999-07 10.1006/jmbi.1999.2932 DOI
Functional Characterization of the Genes Coding for the Terminal Protein and DNA Polymerase from Bacteriophage GA-1. Evidence for a Sliding-back Mechanism During Protein-primed GA-1 DNA Replication Belén Illana, Luis Blanco, Margarita Salas 1996-12 10.1006/jmbi.1996.0653 DOI