Protein

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Genbank accession
XPK41562.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MGAGGFRKNTGRNNTTLPYNVGFLNNVQDTETYNVAVYDELQKVSTATNQMFQAIDEIHEEIDVRIKALHAMNLQFDELENRITTEIETAIADIQTQMGNLSTDDIWDNSVQPPVKLESTVSGFKTSIEGNTTKIQTVEGIVNDQGQEIALVQTEIQNINGSLSQYMKLSEYEATWGVNSSVNGQYAGVKLTNNGTNSQFQVTANKFVVGDGTTGNTPFVFENGRARMEFADIKNVNITTAQVANARIQWAQIDNVSISNAQIQNLSADKITAGSMWGSNWRLTVGGDFVMGGTGGAQLWMNGNRIDFYDGSGALRIRIGSW
Physico‐chemical
properties
protein length:322 AA
molecular weight: 35303,69250 Da
isoelectric point:4,61154
aromaticity:0,08075
hydropathy:-0,37733

Domains

Domains [InterPro]
DC_0177
ATT
1–159
DC_0177 IPR015406 IPR015406
DC_2243
RBD
289–322
DC_2243
XPK41562.1
1 322
Architecture
ATT
RBD
ATT 1-159 | RBD 160-322
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JacquesWildberger_Bas92
[NCBI] 		3398418 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK41562.1 [NCBI]
Genbank nucleotide accession
PQ850610.1 [NCBI]
CDS location
range 17264 -> 18232
strand +
CDS
ATGGGTGCAGGTGGTTTTCGTAAGAACACTGGTCGCAATAACACCACACTCCCGTACAACGTTGGGTTTCTCAATAATGTACAGGACACAGAAACTTATAACGTAGCCGTTTATGATGAACTACAGAAAGTCAGCACAGCTACTAACCAAATGTTCCAAGCTATAGATGAAATTCACGAAGAGATTGATGTTCGTATCAAAGCTCTTCATGCGATGAATCTACAATTTGATGAGCTTGAGAATAGAATTACTACAGAGATAGAAACAGCTATTGCAGACATTCAAACACAGATGGGGAACCTCTCCACTGATGATATTTGGGATAACTCTGTTCAACCTCCGGTAAAGCTAGAAAGCACAGTATCTGGCTTTAAGACAAGTATTGAAGGTAACACAACTAAAATACAGACTGTCGAAGGTATTGTTAATGATCAAGGTCAAGAGATTGCTTTAGTTCAGACAGAGATTCAAAACATTAATGGAAGCCTATCTCAGTATATGAAGCTCTCTGAGTATGAAGCTACGTGGGGTGTTAACTCTTCTGTTAATGGTCAGTACGCTGGAGTTAAGCTAACTAACAACGGAACAAACAGTCAATTCCAAGTAACCGCTAACAAGTTTGTTGTCGGTGATGGTACGACAGGGAATACACCATTTGTGTTTGAGAATGGAAGAGCTAGGATGGAGTTCGCTGATATAAAGAACGTCAACATCACAACAGCTCAGGTTGCCAACGCTAGGATTCAGTGGGCACAGATTGATAACGTATCCATCTCCAACGCCCAAATTCAGAACTTGTCAGCGGATAAAATCACTGCTGGTTCTATGTGGGGTTCTAACTGGAGACTTACTGTTGGGGGTGACTTTGTTATGGGCGGCACAGGTGGGGCACAATTGTGGATGAATGGGAACAGGATAGACTTCTATGATGGAAGTGGTGCTCTGAGAATTAGGATAGGGAGTTGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f28443f879a8950d83a1490142751ceb1f34d6439bd9ea201f2da50d1a7ea3d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6719
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank