Protein

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Genbank accession
XUU32469.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAKGWSFGGLIAALKSAAFLNAGTARGEVITVGQKNAQIPTTAFVTNFNFNTYTFTNGEVLYVEMNSAVNVPPELQKWDLGKFSGAYVIITVLGISDNSNASILVTHGEAARPPIMYYSRGPSGSRSYTAQPLMSCKDAGSANINLFTGASDVGVYYQESDAVAGSAGGYPAAHAGTLEVLPTAYGVQQRYTSIYGNVWVRSRTLDSSQNWADWRELARVNQRDRITEVGAMELYNDIPYIDFHYANSGLDYTARIIAEGYNQLALRGTGQDFKLFLSGQYRGITWGRGWGQETDGNVPYGVYNCEVGPDAWVPILTLQTVTTGQGYGTHISFGAYSRNNDFSNPVISRRGDNGAVHNWTFQNDGNIDYTGNGGPFRFARENWVNSSFMSDIRLASYQETTTWRGYGYRDESGWVITAVINQTADEFIDYVGRRKLQKYMNGTWYDSYSV
Physico‐chemical
properties
protein length:450 AA
molecular weight: 49676,34250 Da
isoelectric point:5,48771
aromaticity:0,13556
hydropathy:-0,35267

Domains

Domains [InterPro]
DC_0590
STR
10–450
DC_0590
cd19958
STR
140–218
cd19958
XUU32469.1
1 450
Architecture
STR
STR 10-450
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUU32469.1
1 450
Domain Start End Length (AA) Confidence
N-terminal 1 21 21 0,9097
Central domain 22 284 264 0,6569
C-terminal 285 450 165 0,8652
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-21
Central
22-284
C-terminal
285-450

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage vB_Shi_2KOFFS
[NCBI] 		3423637 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sp.
[NCBI] 		625 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUU32469.1 [NCBI]
Genbank nucleotide accession
PV615261.1 [NCBI]
CDS location
range 34994 -> 36346
strand +
CDS
ATGGCTAAAGGTTGGTCATTTGGCGGCTTAATTGCCGCCTTAAAGTCTGCTGCATTCTTAAATGCAGGTACTGCTCGTGGTGAAGTAATCACTGTTGGACAAAAGAATGCCCAGATTCCAACCACAGCATTTGTAACAAACTTCAATTTCAATACATACACATTCACCAATGGTGAAGTTCTATATGTTGAGATGAACTCTGCTGTAAACGTTCCACCAGAGTTACAGAAGTGGGACCTTGGGAAGTTCAGCGGAGCATATGTAATCATAACTGTGCTTGGAATTTCTGATAACAGCAATGCCTCCATCCTCGTAACGCATGGTGAGGCAGCACGACCTCCAATCATGTACTATTCTCGCGGACCGTCTGGTAGCAGGTCGTACACAGCGCAACCCCTAATGTCTTGCAAGGATGCCGGAAGCGCGAACATTAACCTGTTTACAGGTGCGTCAGATGTTGGTGTTTATTATCAAGAGTCTGATGCTGTTGCTGGTTCTGCTGGCGGCTATCCAGCAGCACATGCTGGCACACTGGAAGTTTTGCCAACTGCATATGGTGTACAGCAACGCTATACATCCATATATGGTAACGTTTGGGTTCGTAGTCGTACGCTTGATTCCTCGCAGAATTGGGCTGATTGGAGGGAGCTTGCGCGAGTAAATCAGCGCGACCGCATCACAGAAGTTGGTGCAATGGAGTTGTATAACGATATTCCATACATCGACTTCCACTATGCAAACTCTGGTTTAGACTACACTGCACGTATTATCGCAGAAGGATACAATCAGTTAGCTTTACGTGGAACTGGTCAAGACTTCAAGCTGTTCCTGAGTGGGCAGTATCGCGGTATAACTTGGGGCCGTGGTTGGGGCCAAGAGACAGATGGGAACGTCCCTTATGGAGTGTACAACTGTGAAGTTGGTCCAGATGCCTGGGTCCCAATCTTGACGCTACAAACTGTAACAACTGGTCAAGGGTATGGAACCCATATTTCGTTTGGCGCATACAGCAGAAATAATGATTTCTCAAATCCTGTAATCTCACGACGTGGTGATAATGGTGCTGTACACAACTGGACATTCCAGAATGACGGCAACATTGACTACACTGGCAATGGTGGTCCATTCCGTTTTGCACGGGAGAATTGGGTAAACTCTTCTTTCATGAGCGATATTCGCCTGGCCTCCTACCAAGAGACTACCACATGGCGTGGCTACGGGTATCGAGATGAATCTGGTTGGGTAATCACTGCTGTAATCAACCAAACTGCTGACGAATTCATCGACTACGTTGGTCGTCGTAAACTCCAGAAATATATGAATGGAACATGGTATGACAGCTATTCTGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c278df0ec849f6aa8cd1f1cd7eb77e48a07210b6dbcd1a087e0f5aa483b714c7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7158
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50