Protein

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Genbank accession
QDF13796.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNNLLQVFKIEVSGTNLDNIPYYMYGDYDSSSPTTAPTDQQTIDKSIALLRYLQLSRLLSTYSVPVYSKVEFSTPGTAKTIPTGATITVGYISYQPFINTLSVADQAALTTEDMKTAKAAEIIQKLINDSLKGDGTNAIVNEEITVQKTIQRIKNALTTSTVDFIEYENVYLNVPSVTDASVVSYVKL
Physico‐chemical
properties
protein length:188 AA
molecular weight: 20657,13050 Da
isoelectric point:4,69424
aromaticity:0,08511
hydropathy:-0,07181

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_phAPEC6
[NCBI] 		2588085 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDF13796.1 [NCBI]
Genbank nucleotide accession
MK817115.1 [NCBI]
CDS location
range 95762 -> 96328
strand -
CDS
ATGAACAATTTACTACAAGTATTTAAAATTGAAGTTTCAGGGACGAACCTAGATAATATCCCATATTATATGTATGGTGATTATGATTCATCTTCCCCAACAACCGCACCTACTGACCAGCAAACTATTGATAAGTCAATCGCACTTTTGCGTTATCTACAACTTTCACGTTTGCTCTCAACGTATTCAGTACCAGTTTATAGTAAAGTTGAATTTTCTACACCTGGGACTGCAAAAACTATCCCAACTGGTGCAACAATTACAGTTGGTTATATTAGTTATCAACCGTTTATTAACACACTAAGTGTTGCTGACCAAGCTGCACTAACTACTGAAGATATGAAAACTGCAAAAGCTGCTGAAATAATTCAAAAACTAATCAATGATTCATTGAAAGGTGACGGTACTAATGCTATCGTAAATGAAGAAATAACTGTACAAAAAACCATTCAGAGAATCAAGAACGCACTTACTACAAGTACTGTTGATTTTATTGAATATGAGAACGTGTATCTTAATGTTCCTTCAGTTACTGATGCATCAGTAGTATCTTACGTTAAATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4553d7a9451ed6bd3b25ec3fbcde617f706921638e490868460f359da3307de7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9189
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The 3D structure of jumbo coliphage phAPEC6 reveals an unusually high T = 28 triangulation number Tsonos,J., Wagemans,J., Holtappels,D., Hernalsteens,J.-P., De Greve,H., Estrozi,L., Bacia,M., Moriscot,C., Noben,J.-P., Schoehn,G. and Lavigne,R. 2020-04-28 — GenBank