Protein

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Genbank accession
YP_009598268.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNILRSFTETVVTTPTELFPISFEYDEKYDAVHVFLNDVAVEDLGYTVSQVNAVTLKIEPAIPDGTVRIERETDIDKMKYIFDAGALFIDQNVDADFRQIVHSQQEVRDGFIKLRGDVLPLVHGLQEALQQAQEASEAAQEAAAAAEEAAQQTRMAEKVIDKSGLTQQQINDAWLTVENFGAKGDGVTDDSAAFQAYCDSPFTGANIRLANRRAVYIIKKQVDCKGKGIVGNGFGKQSQAAYDLSSIRVMEGDYTNSNADLADIAFINVGAEVRNLQFVSSKLGTISGINVSGYNTTINNVNFTGFKNQVHVIGASVRFSVSDLTSIGAANAGFYFRDKQSDQSTTAYFNQCSWQWGNKAVVFEKEAYGCVFRDNIVEYMDGGFEASVFSNCIFEGNWCESTRSGNAIDWIVNTSYQQLFNCKFGVNYIRAPWIDRTNPNDIAGSNNAGGIQAKNSAVAVTGATGAKIRLNTNGLSTGFADWFGVSNSPLSSRALLLTTQDRASGSNYDTPIVIAAPNGCLWERNRSATDYTPVTKRRLIGANADNTAAYYGVDTYTKRVRKWSTFEHTTNTPGQFLAPTMLTYDSAATTQQVNAGWSITKEAGTTGIYILQRTASTVAPMANPNFVVGGIFTGSATGTLAAVSYSLQAIETYSGSWTAYKEAAGFKIAFRDQAGALVNVTRFTAMFTVVSGF
Physico‐chemical
properties
protein length:693 AA
molecular weight: 75301,98970 Da
isoelectric point:5,11042
aromaticity:0,10678
hydropathy:-0,18442

Domains

Domains [InterPro]
DC_1263
ATT
1–362
DC_1263
Coil
Unmapped
122–152
Coil IPR011050
IPR012334
STR
142–488
IPR012334
IPR024535
ENZ
175–377
IPR024535
DC_0160
STR
293–693
DC_0160
YP_009598268.1
1 693
Architecture
ATT
STR
ATT 1-362 | STR 363-693
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009598268.1
1 693
Domain Start End Length (AA) Confidence
N-terminal 1 191 191 0,9947
Central domain 192 479 289 0,9856
C-terminal 480 693 213 0,9814
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-191
Central
192-479
C-terminal
480-693

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage SH-Ab 15519
[NCBI] 		1916127 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009598268.1 [NCBI]
Genbank nucleotide accession
NC_041905.1 [NCBI]
CDS location
range 28597 -> 30678
strand -
CDS
ATGAATATACTACGCTCATTTACAGAGACAGTGGTGACTACACCTACAGAACTTTTCCCTATCAGTTTTGAATATGATGAGAAATATGATGCTGTACATGTCTTTCTTAATGACGTAGCAGTTGAAGACTTGGGGTACACTGTATCTCAAGTTAATGCTGTTACTCTAAAAATTGAACCTGCTATTCCCGATGGTACGGTTCGTATTGAACGCGAAACAGATATTGATAAGATGAAGTACATCTTTGATGCTGGTGCGTTGTTCATTGATCAGAATGTTGATGCAGATTTTAGACAGATCGTACACTCGCAGCAAGAGGTACGTGACGGTTTTATTAAACTACGTGGTGATGTACTACCATTAGTGCATGGTTTACAAGAAGCTTTACAACAAGCACAAGAGGCTAGCGAAGCTGCTCAAGAAGCTGCTGCTGCTGCGGAAGAGGCTGCTCAGCAAACACGAATGGCTGAGAAGGTTATTGATAAATCGGGACTGACTCAACAACAAATCAACGATGCTTGGCTAACTGTTGAGAATTTTGGTGCTAAAGGTGATGGAGTTACAGACGATAGCGCAGCATTCCAAGCATATTGTGATAGCCCATTTACAGGTGCTAATATTCGTCTAGCTAATCGTAGAGCCGTGTATATCATTAAAAAGCAAGTGGACTGTAAGGGTAAGGGTATTGTAGGTAATGGTTTTGGTAAACAATCTCAAGCTGCTTATGACCTAAGCAGTATCCGTGTAATGGAAGGAGACTACACGAACAGTAATGCTGATCTAGCCGATATTGCATTTATTAACGTTGGTGCGGAAGTCCGTAACCTACAATTCGTATCTAGTAAGCTAGGTACTATTAGTGGTATTAATGTTAGTGGTTATAATACGACAATCAATAATGTGAACTTCACAGGTTTTAAGAATCAGGTGCATGTAATAGGTGCTTCCGTACGTTTCAGTGTGTCTGATCTAACATCTATTGGTGCAGCAAATGCTGGGTTTTATTTCCGCGACAAGCAGAGTGATCAAAGTACAACTGCGTACTTCAATCAGTGCTCGTGGCAGTGGGGTAATAAGGCTGTAGTTTTTGAGAAAGAAGCATACGGTTGTGTTTTCCGTGATAACATCGTTGAGTATATGGACGGTGGTTTTGAGGCTTCCGTATTCTCTAACTGTATATTTGAGGGTAACTGGTGCGAATCAACTCGTAGTGGTAACGCTATTGATTGGATTGTCAACACTAGCTACCAGCAGTTATTTAACTGTAAATTCGGAGTCAACTACATCCGTGCCCCGTGGATAGATCGTACTAACCCTAACGATATTGCGGGTTCTAACAATGCTGGTGGTATTCAGGCGAAGAACAGTGCTGTCGCAGTAACAGGTGCTACAGGGGCGAAAATCAGATTAAATACGAATGGTTTAAGTACTGGTTTTGCTGATTGGTTTGGTGTTTCAAACAGTCCATTAAGTAGTCGCGCACTACTGCTTACAACACAAGACCGAGCATCTGGAAGCAACTATGATACACCTATTGTTATTGCTGCTCCAAACGGTTGCCTGTGGGAAAGAAATAGGAGCGCTACAGATTATACACCAGTAACAAAACGAAGATTAATTGGAGCTAATGCGGATAATACTGCTGCATACTATGGGGTTGATACTTATACTAAGCGTGTACGTAAGTGGAGTACATTTGAGCACACCACTAATACCCCTGGTCAATTCTTAGCACCTACTATGCTAACTTATGATTCTGCTGCGACTACTCAGCAAGTTAATGCAGGTTGGAGTATTACTAAGGAAGCAGGTACTACAGGTATTTATATTTTACAAAGAACTGCATCAACTGTAGCGCCTATGGCTAACCCTAATTTTGTAGTTGGGGGTATATTTACTGGTTCTGCTACAGGTACTCTCGCTGCGGTTAGTTATAGTCTACAGGCTATTGAGACTTACTCAGGGTCTTGGACAGCGTATAAAGAGGCTGCTGGATTTAAGATAGCTTTTAGAGATCAAGCTGGCGCACTAGTCAATGTTACCAGATTTACAGCTATGTTTACTGTGGTGTCTGGATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
21d5aecbd22f5a3d48969bbabd532f394974b1656fef5c7a60a0f60fd2d4f4b2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6481
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome sequence of Acinetobacter baumannii SH-Ab 15519 phage Luo,T., Yang,Y., Wang,Y. and He,P. 2014-07-18 — GenBank