Protein

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Genbank accession
WPH64805.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,66
Protein sequence
MAKSVIKGDGIYEVSVDKIHSDSTIFFANELYGANVEICIRTDNGLVRMGTLKENSYEAVSHGYLHDLVANVTGWTQEFEILYNRGGGTNYSDVLEEIRDNTSMKTFLDLSDTPSSYSGNQGKILLVGNEGIEFAESSGRTIEQKSVGYFSTTSTQEPSGLGASNSLVLSFGPGGITSDGEFLVGSDGIIERLSGDDQIDMEIILRFTRDTNAGEARMVARLMHAPDGVNFVQLKDTFGAILDSSENLGRETFSLKLNLAEGSKTYVEIARDPAGRDTGGIGTFELTGDLATWAPVPSASLDILKTKI
Physico‐chemical
properties
protein length:308 AA
molecular weight: 33198,52480 Da
isoelectric point:4,52441
aromaticity:0,07792
hydropathy:-0,21071

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPH64805.1
1 308
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9947
Central domain 141 297 158 0,0064
C-terminal 298 308 10 0,9926
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-297
C-terminal
298-308

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaP_SJSY21
[NCBI] 		3079971 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPH64805.1 [NCBI]
Genbank nucleotide accession
OR723929 [NCBI]
CDS location
range 66141 -> 67067
strand +
CDS
ATGGCTAAATCTGTAATTAAAGGAGATGGTATATATGAAGTCTCCGTTGACAAGATACACTCTGATTCTACAATCTTCTTTGCTAATGAACTGTATGGCGCAAATGTAGAAATATGCATAAGGACAGATAATGGCCTTGTTAGGATGGGTACCTTAAAAGAAAACTCATATGAGGCTGTATCTCATGGCTATCTGCATGACTTAGTTGCTAATGTGACAGGTTGGACACAAGAGTTTGAGATACTGTACAATCGTGGAGGCGGTACTAATTACTCTGATGTACTAGAAGAGATAAGGGACAACACTTCTATGAAAACTTTCTTAGACCTATCTGATACACCAAGTTCATATTCTGGGAACCAAGGTAAGATATTACTTGTAGGAAATGAGGGTATTGAGTTTGCTGAATCCTCAGGAAGGACTATAGAGCAGAAATCTGTAGGGTATTTCAGCACAACTTCTACGCAAGAGCCCTCAGGACTAGGTGCATCTAATTCTTTAGTTTTAAGTTTTGGCCCTGGTGGGATAACTTCTGATGGAGAGTTTCTTGTAGGAAGTGATGGAATTATTGAACGTCTATCTGGAGATGATCAGATTGACATGGAAATCATACTACGCTTTACAAGAGATACTAACGCTGGTGAGGCTAGGATGGTGGCAAGACTTATGCACGCACCTGATGGTGTAAATTTTGTGCAGCTTAAAGATACCTTTGGTGCAATACTAGATAGTAGCGAGAACCTGGGAAGGGAGACTTTTAGTTTGAAACTTAACCTAGCTGAAGGGTCTAAGACCTATGTAGAGATTGCAAGGGATCCTGCTGGAAGAGATACAGGTGGTATCGGTACTTTTGAACTAACAGGTGACTTAGCTACATGGGCACCTGTTCCTAGTGCATCATTAGATATTCTAAAAACAAAAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cfce6229ee0233444614cd241c87fa72fca7a6bcf37a9bb0b4dbed7198efc453
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6794
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50