Protein

View in Explore
Genbank accession
QBX27604.1 [GenBank]
Protein name
hyaluronidase
RBP type
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MLYYYGAKTGVVDYNGSPLPEAYFAEIEEERNGEYKLIVKYPLSDTDNHLLLLENDLISAPTPQHGKQFFRIKNKVESLDEVVLTCYHITEDIFIRKVKPLNVITKSCQVALDLLIAGSQTALMPFTFDSDITDVHTFTTDKEDTLYNLLLDGKHSIVGTWEGEIVRDNYSISIPNERGSNRGAVISTHYNLEDYARESDTTGVVTRITGENDKGLSITVDSPIIDALPYVNEATFTNNNITDGAEMKRWLERKFSVEKIDKPKVKYTIKAFEVDGQTVHLGDYVTVKSKAHHVDGLFKIVAYKYDALEQVYTEFTFSENAWSGGISRSGLSGAVAEILNVNNSTEEELQRKIDNANAIFDKKQSDLKEEIQQGIVASEVKAEEQIATVNGKISEVQAQANSMDSAIKDADAKAVLALSNVTTVTNDLTKVKNDLSSAKTTLQADIDSLEATSSQVVTDLKKAESDVLDQANKQNELSSRVTQVETTANGTKTTVAQLDKTVSGLTGSVDSVTQSVKTFEDSLEGVYTTLSKIQVGSGNLIAKSDLTNGYIDSDGTFKTTTTDFTTGKIDVSTKKEVTVTVPANVVIYASKYDSSGKFISREYGTAQNTQYSKTFTFASNVASVKFSMAGVYAKPYKVEYGSTATDWVPNQTDSTYELAQYKQTIDTQLTSLQRTTQTNANNIETNKTTIETTVNGIKTDISALQTYVNEDGTRTTAMQTYVKDENAKQTTALRTEVSNTYASKAQLTSDVNGLTAKFESIQVGGVNRFKKSDTVLNPRAISNAFVIMPTYLDTIEEDYTVTLWLKDIVNNPDNQVTIGLCNPTSANDNEQRNNNVPIINGKATVKFKKPAVNTRTAVIFYPNAGGYKPASTANAVPYKYKIEKGNISTDWSPAPEDVENYTNTKIAEYKQTVDQNYASLSAQVGTKVNTSTFDQTVNGINLNISTLQNDYNTTKSDFQTVKQTSDMYQRVLGKTEGDVTTNITNMVATSEVIQTTVSKAVEDSSDGNIIYDPSKLSKWQKTNDLADVRLILGSTANLLIITSTGNTTNVNYGFKIPITSNFTNNGETYAYRFVLDVDVIPDAGIIVQLMYNNYTFGSFQINPTKTGNNQVFTGTFVPYRAIDIDEYALNVKIVKNGTVSFHQMMIVKGSAIPTEFSDNTNLQLISTAKQTTATQTQVTQLADSYAIKVLNSSKDIITRINMDYNGITLQGRLIHLDGQTLIDNAVIKDAHILNVDAGKIQTGYLDANRIKAGSITAEKMVVDSAMINKLTVDDALVNKLTAKTAFITSVKAIDITGERINGGVISALNGNMKIDLNGSKLSFYNNATIEFNSPTNAIFRKLNDKTGFMELADDSYGGVYAGFGVTSNNAGINSQSEGYFAGIRIFRSDSTKDRIDLYGDTITFNHSFSGAGRLYWSNTDYKGKDWNLFEILRAFNSGMKNLGQSYFQDLGF
Physico‐chemical
properties
protein length:1452 AA
molecular weight: 159625,17200 Da
isoelectric point:5,09223
aromaticity:0,08402
hydropathy:-0,36832

Domains

Domains [InterPro]
DC_1274
ATT
7–587
DC_1274 DC_2041 DC_0720
IPR007119
Unmapped
27–317
IPR007119 PTHR47357 IPR012892
IPR010572
ENZ
103–318
IPR010572 Coil Coil
QBX27604.1
1 1452
Architecture
ATT
STR
STR
ATT 7-587 | STR 610-790 | STR 814-1447 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan400
[NCBI] 		2548150 No lineage information
Host Streptococcus parauberis NCFD_2020
[NCBI] 		873447 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus parauberis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX27604.1 [NCBI]
Genbank nucleotide accession
MK448929 [NCBI]
CDS location
range 29596 -> 33954
strand +
CDS
ATGCTTTATTATTATGGAGCAAAAACCGGCGTAGTAGATTATAACGGTAGTCCACTACCAGAAGCCTATTTTGCAGAGATTGAAGAAGAAAGAAATGGCGAGTATAAACTAATCGTTAAATACCCATTATCAGATACTGATAACCATTTGTTACTACTAGAAAATGACCTAATATCCGCACCAACACCACAACATGGCAAGCAATTTTTTAGGATTAAAAATAAAGTAGAATCATTAGATGAAGTTGTGCTGACGTGCTATCACATTACTGAAGATATTTTTATCCGCAAGGTAAAGCCACTTAATGTTATTACTAAGTCTTGTCAAGTTGCACTAGACTTATTAATTGCAGGCTCACAAACTGCACTAATGCCATTTACATTTGATAGTGATATTACAGATGTACATACGTTTACGACTGATAAAGAGGATACGCTCTATAATCTATTGTTAGATGGTAAACACAGTATCGTAGGAACATGGGAAGGTGAGATAGTCAGAGACAACTACTCTATATCAATACCAAATGAACGTGGTAGCAACCGTGGAGCAGTCATCTCAACGCATTACAATCTAGAAGATTATGCACGAGAAAGTGACACAACAGGAGTTGTCACACGTATCACTGGAGAAAATGATAAAGGATTATCTATCACAGTAGATAGTCCTATTATTGATGCTTTGCCATATGTTAACGAAGCTACATTTACAAACAACAATATCACTGATGGCGCAGAAATGAAGAGGTGGTTAGAGCGTAAATTTAGTGTTGAAAAAATCGATAAACCAAAAGTAAAATATACAATTAAAGCCTTTGAAGTTGACGGACAAACAGTCCACTTGGGCGATTATGTAACTGTTAAGAGCAAGGCTCACCATGTCGATGGCCTATTTAAAATTGTAGCTTATAAATACGATGCATTAGAACAAGTCTACACCGAATTTACGTTTAGCGAAAATGCTTGGTCAGGCGGAATTAGTAGAAGCGGTTTATCAGGAGCAGTTGCGGAAATTTTGAATGTTAATAATAGCACAGAAGAAGAACTGCAACGCAAGATAGACAATGCTAACGCTATATTTGACAAAAAACAATCTGATTTAAAAGAGGAAATCCAACAAGGAATCGTAGCTTCGGAAGTTAAAGCCGAAGAACAAATTGCTACTGTTAATGGTAAAATATCAGAAGTCCAAGCACAGGCTAATAGCATGGATAGCGCTATTAAGGATGCTGATGCAAAAGCTGTTTTAGCATTAAGTAACGTCACGACTGTTACAAATGATTTAACTAAGGTGAAAAATGACTTATCAAGCGCAAAGACAACGTTACAAGCTGACATTGATAGCTTAGAAGCAACATCTTCACAAGTCGTTACAGACTTAAAAAAGGCTGAATCTGACGTATTAGATCAAGCCAATAAGCAAAACGAATTATCAAGTCGTGTTACTCAAGTAGAAACAACCGCAAACGGTACAAAAACGACTGTGGCTCAATTAGATAAAACTGTCAGCGGATTAACTGGAAGTGTAGATAGCGTGACACAATCTGTTAAAACTTTTGAGGATAGTTTGGAAGGCGTTTATACTACGCTTTCTAAAATTCAAGTTGGCAGTGGGAACTTGATAGCAAAATCAGATTTAACTAATGGCTATATTGATTCTGACGGTACATTCAAAACAACGACAACAGATTTTACAACAGGTAAAATAGATGTCTCAACTAAAAAAGAAGTGACTGTTACCGTTCCAGCTAATGTAGTAATTTATGCTTCTAAATACGATAGTTCTGGTAAGTTTATTAGTCGTGAGTATGGCACAGCACAAAACACACAATATTCTAAGACATTTACATTTGCATCAAACGTAGCATCTGTTAAATTTTCAATGGCTGGTGTATATGCTAAGCCTTACAAAGTGGAATATGGAAGCACTGCAACAGACTGGGTGCCTAATCAAACAGACAGCACGTACGAACTTGCACAATATAAACAAACTATTGATACTCAATTAACTAGTTTACAGCGTACAACACAAACAAATGCAAATAATATCGAGACAAACAAAACTACCATCGAGACAACTGTTAATGGTATAAAGACTGATATCTCAGCATTACAAACTTATGTTAATGAAGATGGCACAAGAACGACTGCTATGCAAACATATGTCAAGGATGAAAATGCAAAGCAGACAACTGCATTAAGAACAGAAGTGTCTAACACTTACGCAAGCAAAGCTCAATTGACGTCTGATGTAAATGGACTGACTGCAAAATTTGAGAGCATTCAAGTCGGTGGAGTTAACAGATTTAAAAAATCCGACACTGTTTTAAATCCACGAGCTATAAGCAATGCATTTGTAATAATGCCAACATACCTCGACACAATTGAGGAAGATTACACGGTAACGCTTTGGTTAAAAGATATTGTCAACAATCCAGATAATCAAGTAACGATTGGATTATGTAATCCTACGAGCGCAAATGACAATGAGCAAAGAAACAATAATGTTCCGATTATTAATGGCAAAGCAACTGTTAAATTTAAAAAGCCCGCTGTCAATACTAGGACAGCGGTCATTTTTTACCCAAATGCTGGAGGCTATAAACCAGCAAGCACAGCGAACGCAGTACCGTATAAATACAAAATTGAAAAAGGCAATATCTCAACAGACTGGTCACCAGCCCCTGAAGATGTTGAAAATTACACAAATACTAAAATTGCTGAATACAAACAAACTGTAGACCAAAACTACGCAAGCTTATCAGCGCAAGTCGGAACCAAGGTAAACACATCAACGTTTGACCAGACTGTAAACGGTATTAATTTAAATATCTCAACACTTCAAAATGATTACAATACTACTAAATCAGACTTTCAAACGGTCAAACAAACATCTGATATGTACCAACGTGTGCTTGGAAAAACCGAAGGCGATGTCACAACAAATATCACAAACATGGTTGCAACTTCGGAAGTTATCCAAACGACTGTTAGTAAGGCAGTTGAGGATAGTAGTGATGGGAATATTATTTATGACCCAAGTAAATTGTCTAAGTGGCAAAAAACAAATGATTTAGCAGATGTACGACTTATTTTAGGGTCAACAGCAAATCTCTTAATAATAACAAGTACAGGTAATACAACCAATGTTAATTACGGATTTAAGATTCCAATAACATCAAACTTCACAAATAATGGTGAAACTTATGCTTATCGATTTGTGTTAGATGTTGATGTTATTCCAGATGCTGGGATTATCGTGCAACTAATGTACAATAATTACACTTTTGGTAGCTTCCAAATTAACCCTACAAAAACAGGTAATAACCAAGTTTTCACAGGAACATTTGTACCATATCGAGCTATTGATATAGACGAGTATGCGTTAAATGTAAAAATTGTCAAAAATGGAACAGTATCATTCCACCAAATGATGATTGTTAAAGGTTCAGCAATCCCAACTGAATTTAGCGATAACACTAACTTACAGTTAATTAGTACTGCAAAACAAACAACTGCCACACAAACGCAAGTCACACAACTTGCTGATAGTTATGCAATCAAAGTCTTAAATAGTTCGAAAGACATAATAACAAGAATTAATATGGACTACAATGGAATTACATTGCAAGGTAGACTTATCCACCTCGATGGTCAAACGTTAATAGATAATGCCGTCATTAAAGATGCACACATACTTAACGTAGATGCCGGGAAGATACAAACTGGTTATCTTGATGCTAATCGTATTAAAGCAGGAAGCATAACCGCTGAAAAAATGGTTGTCGATAGCGCAATGATAAATAAACTGACTGTAGATGATGCACTAGTTAATAAATTGACTGCAAAAACTGCTTTCATCACATCTGTAAAAGCAATTGACATTACTGGCGAACGTATCAATGGTGGTGTTATCAGTGCGCTGAATGGAAACATGAAGATTGATTTGAATGGTTCTAAATTATCATTTTACAATAACGCCACGATTGAATTTAACAGTCCAACAAATGCGATTTTTAGAAAATTGAATGATAAGACTGGATTTATGGAATTGGCCGATGATTCATACGGTGGAGTTTACGCAGGATTTGGAGTTACATCAAACAACGCAGGCATTAACAGTCAATCAGAAGGCTACTTCGCTGGAATTCGTATTTTTAGGTCAGATAGTACAAAAGATAGGATTGATTTGTACGGCGATACTATAACATTTAATCATTCATTTTCTGGCGCAGGAAGGCTTTACTGGAGTAATACCGATTACAAAGGGAAAGACTGGAACTTATTTGAGATATTGAGAGCATTTAATTCCGGGATGAAAAATCTCGGTCAGTCATACTTCCAAGATTTAGGTTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
223cc8b4bc40e0ec53bd8fe52a973a4a48330d53e8d54a95b6953eeb9cbe9725
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7230
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank