Protein

View in Explore
Genbank accession
WDS38387.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MPMIVPMAAAAFASAVTFVSATAATISAIGGLTITAGTTLTVAGVAKLGMAAMSLYSMTRKPKAAAGSPSPIAFKADPNAYIPFVAGGPVATGGNIVHLRATGAKHKYLVYLTALSHGGPIHSYGDFTADDSVVTFGADQGEGATGTYLNRMWQRFAVGLMAGTALALTSVGSKDTPGDHGGHPAEWTGTHRLCGIAHTMLCLEADPAKYPAIPKPLWVVRGGPVYDPRKDSTVPGGSGPQRASDRTTWSTDGNQNPFLQALTFAIGHVYNGIRVGGVGMPVKGIDVQAFVYGANVADANNWKIAWVWNTGMRKWDVLATMLQAGAGQPLVRAGMLSCSVEAPRVSLDTITEADLRGDFSVTGSANTRTRKNTLIPRCKSPNHKWAVVPFGEVTGAVYVAEDGGVRRPMEVEYEAVSADDGGVQVRQLAAYDLTNLREGLVATIPCSARFLKYRAGDCLTVNAPSTLMNGQKVVVQKREFDVERRIMLLTVRSETDGKHAYALGQTDAPPPSPTLTGNDGLVIEAPDPDAWTVTPGTSTGTGPVIPTIVVTPTDPTGAHYDDPAATHVVVRYRIYGLNSDTGQPYPWVYEEYPATASRIELKGAAPGTVYEVQIAYRVRGIVGDFRSYGNVTTGDLIATSTLFLGVGPDKRPALDVIRETSALGEAALANVVNIVKNRGWAEALLFLEGKSLGTIVLDEIRPFIEGATIELQHLSLLGVASPDGSSFILDIDTVRISPTETFAQRLSNIGGRLGGAELDILHQSTLIYDLQTGKANVSDLTFLSLQVSGQSANITQLFNITYAQGQIIDASATLAINVNNQITGYKVNGVTREFDILASVFRVWDGVSAVPMFAVDGSGAYVAGSKVRTDSLQNNAVTVPDIQVASWTMGGTGGEQLILAGGVSMARAGFVRASASVAQHFPSGDRNWSFRLEIAGQNAYQCYGANGQDSVPLSGAVYVGAGYTPVYLWWNGQSSVNIDYRALEVLGVMK
Physico‐chemical
properties
protein length:990 AA
molecular weight: 104616,31050 Da
isoelectric point:6,01421
aromaticity:0,07980
hydropathy:0,02455

Domains

Domains [InterPro]
DC_0187
STR
1–923
DC_0187
WDS38387.1
1 990
Architecture
STR
STR 1-923 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS38387.1
1 990
Domain Start End Length (AA) Confidence
N-terminal 1 13 13 0,9329
Central domain 14 214 202 0,2432
C-terminal 215 990 775 0,2566
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-13
Central
14-214
C-terminal
215-990

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage W2
[NCBI] 		3028192 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Caulobacter segnis
[NCBI] 		88688 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS38387.1 [NCBI]
Genbank nucleotide accession
OQ330851.1 [NCBI]
CDS location
range 15349 -> 18321
strand +
CDS
GTGCCGATGATTGTTCCGATGGCCGCCGCCGCTTTCGCGTCGGCCGTCACCTTCGTTTCCGCGACTGCCGCCACGATTTCGGCCATAGGCGGCCTGACGATCACCGCAGGGACCACGCTAACCGTGGCGGGCGTGGCGAAACTCGGCATGGCCGCCATGTCGCTGTACAGCATGACGCGCAAGCCGAAGGCGGCGGCGGGGTCGCCCTCGCCTATCGCCTTCAAGGCGGACCCGAACGCCTACATTCCGTTTGTGGCGGGCGGCCCGGTGGCGACCGGCGGCAACATCGTTCACCTGCGGGCGACGGGGGCGAAGCACAAGTATCTGGTCTATCTGACGGCCCTGTCTCACGGCGGCCCCATCCACAGCTATGGGGACTTCACGGCAGACGATAGCGTGGTGACCTTCGGCGCGGACCAAGGGGAGGGCGCGACCGGAACCTATCTGAACCGCATGTGGCAGCGGTTCGCCGTGGGTCTGATGGCGGGCACCGCCCTGGCCCTGACGTCGGTGGGCAGCAAGGACACGCCCGGCGACCACGGCGGACACCCGGCGGAATGGACCGGCACCCATCGGCTGTGCGGGATCGCGCACACCATGCTGTGCCTGGAGGCCGACCCCGCTAAGTATCCGGCAATTCCCAAGCCCCTGTGGGTGGTGCGTGGCGGCCCGGTCTATGATCCTCGCAAGGACAGCACGGTGCCCGGCGGCAGCGGCCCGCAGCGCGCCAGCGACCGCACCACGTGGTCCACGGATGGAAACCAGAACCCCTTCCTTCAGGCGCTGACCTTCGCAATCGGCCACGTCTACAACGGAATTCGCGTCGGCGGCGTGGGCATGCCGGTGAAGGGGATCGACGTACAGGCGTTCGTCTACGGCGCGAACGTCGCGGACGCGAACAATTGGAAAATCGCATGGGTGTGGAACACCGGCATGCGAAAGTGGGACGTCCTGGCAACCATGCTTCAGGCTGGCGCAGGCCAGCCGCTGGTGCGGGCGGGCATGCTGTCCTGTTCCGTCGAGGCCCCGCGCGTCTCCCTGGACACCATCACGGAAGCCGACTTGCGCGGCGACTTCAGCGTGACCGGCTCCGCCAACACGCGCACCCGGAAAAACACCCTCATTCCCCGGTGCAAGTCGCCGAACCACAAATGGGCGGTGGTCCCCTTCGGCGAGGTTACCGGCGCGGTCTACGTGGCCGAAGACGGCGGGGTGCGCCGCCCCATGGAAGTGGAATATGAGGCCGTTTCTGCGGATGACGGCGGGGTGCAGGTGCGCCAGCTGGCTGCCTACGACCTGACCAACTTGCGGGAAGGCCTTGTGGCCACTATCCCGTGTTCCGCCCGCTTCCTGAAGTATCGCGCGGGCGACTGCCTGACCGTCAATGCGCCGTCCACGCTCATGAACGGCCAGAAGGTGGTGGTTCAAAAGCGCGAATTCGACGTTGAACGCCGGATCATGCTTTTGACGGTCCGCAGCGAGACGGACGGGAAGCACGCCTATGCGCTTGGGCAGACCGACGCGCCGCCGCCCTCGCCGACCCTGACCGGTAACGACGGGCTTGTGATCGAAGCGCCGGACCCGGACGCCTGGACGGTCACGCCGGGCACCTCCACGGGCACCGGCCCGGTAATCCCCACCATCGTGGTGACGCCCACCGATCCGACCGGCGCGCATTATGATGACCCGGCCGCCACGCACGTGGTGGTCCGATATCGCATCTATGGGCTGAACTCGGACACCGGCCAGCCTTACCCGTGGGTGTACGAGGAATACCCGGCCACGGCCTCGCGCATCGAACTGAAGGGCGCGGCCCCTGGCACCGTGTATGAGGTGCAAATTGCGTACCGGGTGCGCGGCATCGTCGGCGATTTCCGCAGCTATGGGAATGTGACGACGGGCGACCTTATCGCCACGTCGACTCTGTTCCTGGGCGTCGGCCCGGACAAGCGCCCGGCCTTGGACGTGATCCGCGAAACCTCGGCGCTGGGGGAAGCCGCCCTGGCGAACGTGGTCAACATCGTCAAGAACCGGGGTTGGGCGGAAGCCCTGCTGTTCCTTGAGGGCAAGTCGCTTGGGACGATCGTTCTGGACGAAATCCGCCCGTTCATTGAAGGGGCCACGATCGAACTTCAGCACCTGTCTCTGTTGGGCGTCGCCAGCCCAGACGGATCGTCGTTCATTCTCGATATCGACACGGTGCGCATCAGCCCCACCGAAACCTTCGCCCAGCGCCTTAGCAATATCGGCGGGCGGCTGGGCGGCGCTGAACTGGACATTCTGCACCAATCGACGCTGATTTATGACCTTCAGACCGGTAAGGCAAATGTCTCTGACCTGACGTTCCTAAGTCTACAGGTGAGCGGACAGAGTGCGAATATTACGCAACTGTTCAACATTACTTATGCACAGGGCCAGATTATTGATGCGTCGGCCACCCTGGCCATCAACGTCAACAATCAAATCACGGGCTACAAGGTAAACGGCGTCACGCGAGAGTTCGATATTCTCGCGTCGGTGTTCCGGGTTTGGGACGGCGTGTCGGCTGTCCCCATGTTCGCGGTGGACGGATCAGGCGCTTATGTGGCCGGGTCCAAGGTTCGCACGGACAGCCTGCAAAACAACGCGGTGACGGTGCCGGACATTCAGGTGGCTAGCTGGACCATGGGCGGGACCGGCGGCGAGCAACTGATTTTGGCGGGCGGCGTGAGCATGGCCCGCGCCGGGTTCGTGCGCGCTTCCGCGTCCGTGGCCCAGCACTTCCCGTCCGGCGACCGTAATTGGTCCTTCCGTCTCGAAATCGCGGGGCAGAACGCATATCAGTGCTACGGGGCCAACGGCCAGGACTCGGTCCCGCTGTCCGGCGCGGTCTATGTCGGCGCGGGCTACACGCCTGTTTACCTGTGGTGGAACGGCCAATCATCGGTGAACATCGACTATCGGGCGCTTGAAGTACTGGGGGTGATGAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
03caecb12ce289b7f5239e11caa4208a84bd10686b8cd0a2b807d304cb37d7dd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7220
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New species of Caulobacter bacteriophages in the Kronosvirus genus that infect the plant growth-promoting Caulobacter strain CBR1 Mohammadi,T. and Millwood,A. 2024-04-20 — GenBank