Protein

View in Explore
Genbank accession
QIG59192.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MEFVVSRIPDGVPVRVYLGEIGDDTDVTDDFEALKDEDAVYHIIEGAGSGALGAVSKVFGFILKPIAKLFGLNMSANANYTATNNQTTSPNNSLTDRSNKPRPYERSYDICGTVQTIPNDLMQTYKAFNSTGALLEYSYYDAGRGHLYIEADGVTEGDTLISDITGSSVAVYAPYTSPNNTTSPQVQIGDVIDQKLYVTYSNDDVDGIVLKAPNDIGANPSSGGTAKRTSTTGYIYDPSGDSAFSEFLSVGDVAVLSNFDVADVTNLNGSFEVLYVDDFEVRLAVNGASNWAALTSGQTYALTERSDTFIGPSDTYDVSLTDWYYMVRGEVDRVLANVVGQNGIYKYDGGYNRTSVTVELQYQMIDSQRNPLSDIYTVQATITGNSTDYVGTSIYGQLPTASRFRARMRRITNFDKDYDGTVSDEITFINLYGQSLDTTPHYGNRTTVHCARKQTPRAASIDNPELRMIATEMCYKYLGNGVFDTVMTPNTQAVQSLIRLARDPAVGNLELTTANMDKLLAVQEEIESYFGSELAGQFCYTFDDYDTTMQDIVQTIAEAVFCTAYRKGADIMLRFDRPVAGPEMVFTHRSKTTGTEKWTRTFNDSTTYDSLSFSYIDPDTNVQETIYIPEELGANTEEYESKGVRNYQQAYWLAWRRYQRNALSKVVVEFEATEEGALATPGGVISVVKGSRIAPQDGYVAAVNGLTLTLSQPVAFTPGDDHSIILKKRDGSVQSISVIKGSHDREVIMLSAPEEAIYTGNSALKTEFSFGNEARHNAQKIVVSSIEPGDDRTVKITGYNYDDGFYKYDGVAPYGSGFSDGFSNGFN
Physico‐chemical
properties
protein length:827 AA
molecular weight: 90840,29230 Da
isoelectric point:4,52174
aromaticity:0,10641
hydropathy:-0,34595

Domains

Domains [InterPro]
DC_0118
STR
1–659
DC_0118 DC_0808
NF040662
Unmapped
330–807
NF040662
QIG59192.1
1 827
Architecture
STR
RBD
STR 1-659 | RBD 676-823 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_XY1
[NCBI] 		2681674 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG59192.1 [NCBI]
Genbank nucleotide accession
MN927225 [NCBI]
CDS location
range 384 -> 2867
strand -
CDS
ATGGAGTTTGTTGTTAGCCGTATTCCGGACGGTGTGCCTGTGCGCGTCTACCTCGGCGAGATTGGCGATGATACTGATGTTACAGACGACTTCGAAGCGCTTAAAGACGAAGACGCCGTGTACCATATTATTGAGGGTGCGGGTAGCGGGGCGCTTGGTGCAGTTAGTAAGGTATTTGGTTTTATCCTTAAGCCAATCGCTAAGTTGTTTGGCCTGAACATGTCCGCAAACGCCAACTATACGGCGACTAACAACCAGACAACATCGCCAAATAACAGCCTCACGGACCGCTCAAACAAACCACGCCCTTACGAGCGCTCTTATGACATCTGCGGGACTGTGCAGACAATCCCTAACGACCTTATGCAGACGTATAAAGCGTTCAACTCCACTGGTGCTTTGCTGGAGTATTCGTACTACGACGCCGGGCGCGGACATCTGTATATTGAGGCCGATGGCGTCACGGAAGGCGACACCCTGATAAGCGACATCACAGGTTCCTCTGTTGCCGTGTACGCGCCGTATACGTCACCGAACAACACCACATCGCCGCAGGTACAAATCGGCGACGTCATTGATCAGAAGCTCTATGTGACGTACTCCAATGACGACGTTGACGGTATTGTGCTCAAAGCGCCAAACGACATTGGGGCTAACCCAAGCTCCGGTGGAACCGCCAAACGTACTTCGACCACCGGCTACATCTATGACCCGTCGGGCGACTCTGCTTTTTCTGAGTTTCTTAGCGTCGGTGATGTCGCGGTGCTGAGCAACTTTGACGTTGCTGATGTCACTAACCTGAACGGCTCGTTTGAGGTTTTATACGTTGATGACTTCGAAGTAAGATTAGCGGTAAACGGTGCGTCTAACTGGGCGGCGTTGACCAGCGGGCAGACGTACGCCCTAACAGAGCGTTCAGATACGTTTATCGGCCCGAGCGACACCTATGACGTATCCCTGACAGACTGGTATTACATGGTGCGCGGAGAAGTTGACCGGGTGCTTGCGAACGTTGTCGGGCAGAACGGCATCTACAAATACGACGGCGGCTATAACCGCACCAGCGTAACGGTGGAACTCCAGTACCAGATGATTGACTCTCAGCGTAACCCGTTGAGCGATATTTACACGGTACAGGCTACGATTACTGGTAATAGCACGGATTACGTTGGTACGTCTATCTACGGGCAGTTGCCGACCGCGTCTCGTTTCCGCGCCCGTATGCGCCGTATAACGAATTTTGATAAGGACTATGACGGAACGGTAAGCGACGAGATAACATTCATTAACCTGTATGGGCAGTCTCTGGACACCACTCCACACTACGGCAACCGAACTACCGTACATTGCGCCCGTAAACAGACGCCGCGGGCCGCCAGTATCGATAACCCTGAACTGCGCATGATTGCGACCGAGATGTGCTACAAATACCTCGGCAATGGGGTATTCGATACAGTAATGACACCGAACACGCAAGCCGTACAATCTCTAATTCGACTGGCGCGCGACCCCGCAGTAGGCAATCTGGAACTGACAACGGCAAACATGGACAAGTTACTTGCTGTGCAGGAAGAAATTGAGTCCTATTTCGGAAGTGAATTAGCAGGGCAATTCTGCTACACGTTCGACGACTATGACACAACCATGCAGGACATCGTCCAGACCATAGCGGAAGCCGTTTTCTGTACTGCGTACCGTAAAGGTGCGGATATTATGCTGCGATTCGACCGTCCTGTCGCGGGGCCTGAAATGGTGTTCACCCACCGCAGCAAAACTACCGGTACTGAGAAATGGACCCGCACGTTCAACGATTCGACAACCTACGATAGCCTGTCGTTCTCATACATCGACCCGGATACGAACGTACAGGAAACTATTTATATCCCGGAAGAACTAGGGGCAAACACCGAGGAATACGAATCGAAGGGCGTGCGCAACTATCAGCAAGCGTACTGGCTGGCGTGGCGTCGCTACCAGCGCAATGCGTTAAGTAAAGTTGTCGTAGAGTTTGAAGCTACCGAAGAAGGTGCGCTCGCTACCCCAGGCGGTGTAATCAGCGTAGTTAAAGGCTCGCGTATTGCGCCACAGGACGGCTATGTTGCTGCCGTTAATGGGCTTACGCTGACACTGTCACAGCCGGTTGCGTTTACTCCGGGTGATGACCACTCCATCATCCTCAAGAAGCGCGATGGCTCTGTACAGAGTATCTCCGTTATCAAAGGAAGCCACGACCGCGAAGTGATTATGCTCTCCGCGCCGGAAGAAGCAATCTACACGGGGAATAGCGCACTAAAAACTGAGTTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGAAGATAGTTGTTTCTTCAATCGAACCCGGCGACGACCGCACGGTCAAGATTACAGGCTACAACTATGACGACGGATTCTATAAATACGACGGCGTCGCGCCATACGGCAGCGGTTTCTCCGACGGATTCAGCAATGGTTTTAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0735aab99b69af87e7236a53c4829939a60091aa10a8718102de803c13810c81
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3120
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of the virulent phage vB_EcoS_XY1 infecting multidrug resistant Escherichia coli Fu,P. and Zhao,Q. 2020-10-25 — GenBank