Protein

View in Explore

Genbank accession

YP_010645522.1 [GenBank]

Protein name

tail fiber protein and host specificity

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,92

Protein sequence

MQIWIHDRSMRKVCALNNEIPGMLPYSNSQWHPYLEYSTSTFDFTIPKIVNGKLHDDIKYINDQMYVSFYYDNSYHVFYVSQLVENDFNFQVTCNNTNLELAAEISRPLASVDGPKTIEWYLQNLDLLGFAGLEIGFNEIPDRTRTITFESQNGTKLEQLHSLMNQFDAEFVFRTDLNRDGTLKKFVIDIYQRPDENHHGIGKVRGDITLYYQTGLKGVQISSDKTQLFNAGYFVGKDGLTLGSVVFEEKNELGQVEFYSLKDSPMVYAPLSADKYPSAMGGANEIDRWTRKDFQTEYADINSLKAYALRTIKQYAYPLMTYTVSVQSSFLENYNDINLGDTVKIINNNFIDGLALEARVSEMVISFDMPQNNSVVFTNFRKLDNKPSSELQQRIDEIVSKSLPYHVEIRTTNGTAFKNGVGRSTVKPVLKQGDKIVDATYRFVIDGTIKYSGMTYDMVASDITEPTTLTVAAWVDDKEVASEEVTFFNVSDGKHGEKGDIGPKGADGRTQYTHIAYANSADGKKDFSTSDSNREYIGIYVDFEESDSVDPSKYNWTLVKGADGTQGVPGPKGADGQTPYFHTAWSYSADGKDRFTTIYPNLNLLDGTRDFSGNWVGALEGGSDGTYKGLIVKKRIYQWQGLYKEFTIPKDGIYTFSAYVKSSGDNANVCSYLSINGRDASYLMPRWVLGNNFDWFRDSFSVSLKKGDIVYANYYMGGNAKDSALWTAGHKWEEGSVATPWMPSTNEVKTSDYPSYIGQYTNYMEVDSPNPSDYTWSLIRGNDGAQGPQGERGPQGPRGDQGIPGPKGADGKTHYTHIAYADTVSGSGFSQTDFNKPYIGMYQDFNEVDSNNPQDYRWTKWKGSDGRDGIPGKAGADGRTPYVHFAYADSADGRNGFSLTQTGTKRYLGVLTNFVKEDSTNPADYTWNDTAGSISVGGRNLLVKTNQGITNWDWTMSNGDKSVEEVNIDGIRAVKLTKGTKTANTGGNYIQYQGLLRKLIRPNTQYTLSFDVKPSVDVSFSATLIRGNYQAELTDTVLMNKALANQWTKVSCVLTSKETLSGDLNQVVYLAGMPTTNGNWLIIKNIKLEEGNIPTPWTPAIEDIQEEIDSKADDVLTQEQLNKLNEMNSIVKAELAAKASLDTLDQWKQAYQDFVNANSADRAQAEKDLADASARVTKLENDLKDMSERWNFIDSYMTASNEGLVVGKTDNSSSMLFSPNGRISMFSAGHEVMYISQGVIHIENGIFSKTIQIGRYREEQDIINPDRNVIRYVGGS

Physico‐chemical properties

protein length:	1276 AA
molecular weight:	142646,82480 Da
isoelectric point:	5,04255
aromaticity:	0,11285
hydropathy:	-0,54060

Domains

Domains [InterPro]

DC_0002
STR
1–565

DC_0002 IPR008983 DC_1328 IPR008979 Coil

IPR010572
ENZ
141–382

IPR010572 PTHR24637 G3DSA:2.60.120.260

DC_1971
STR
562–749

DC_1971 G3DSA:1.20.5.320 DC_0002

IPR008983
RBD
639–718

IPR008983

YP_010645522.1

1 1276

Architecture

STR

STR 1-1276

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0002	STR	DC_0002	1	565	Novel HMM	DC_0002	Central	Low	Positional only	166 proteins / 166 hits
IPR010572	ENZ	DC_0675	141	382	InterPro cluster	Tail spike domain	Central	High	Text match	419 proteins / 419 hits
PTHR24637	Unmapped	-	493	878	PANTHER	COLLAGEN	-	-	-	-
DC_1971	STR	DC_1971	562	749	Novel HMM	DC_1971	Central	Low	Positional only	95 proteins / 95 hits
IPR008983	RBD	IPR008983	638	730	Merged direct domain	Tumour necrosis factor-like domain superfamily	C-terminal	Low	Positional only	19 proteins / 19 hits
IPR008983	RBD	IPR008983	639	718	Merged direct domain	Tumour necrosis factor-like domain superfamily	C-terminal	Low	Positional only	19 proteins / 19 hits
DC_1328	STR	DC_1328	749	864	Novel HMM	DC_1328	Central	Low	Positional only	136 proteins / 136 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	784	830	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
DC_0002	STR	DC_0002	861	1276	Novel HMM	DC_0002	Central	Low	Positional only	166 proteins / 166 hits
IPR008979	STR	IPR008979	947	1090	Merged direct domain	Galactose-binding-like domain superfamily	Central	Low	Positional only	24 proteins / 24 hits
G3DSA:2.60.120.260	STR	G3DSA:2.60.120.260	973	1119	Merged direct domain	G3DSA:2.60.120.260	Central	Low	Positional only	264 proteins / 264 hits
Coil	Unmapped	-	1162	1189	Coils	Coil	-	-	-	-

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Streptococcus phage CHPC1091 [NCBI]	2365026	No lineage information
Host	Streptococcus thermophilus [NCBI]	1308	cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Genbank protein accession

YP_010645522.1 [NCBI]

Genbank nucleotide accession

NC_070666.1 [NCBI]

CDS location

range 14741 -> 18571
strand +

CDS

ATGCAGATTTGGATTCATGACAGAAGCATGCGCAAAGTGTGTGCATTGAATAATGAAATCCCCGGAATGTTACCTTATTCGAATAGTCAATGGCACCCTTACCTTGAATACTCAACAAGTACATTTGATTTCACAATTCCTAAAATCGTAAATGGTAAGTTACACGATGATATCAAATATATCAATGACCAGATGTACGTGTCATTTTACTACGACAATTCCTACCACGTTTTTTATGTTTCTCAACTCGTTGAAAATGATTTTAATTTTCAAGTGACTTGTAATAATACTAACTTGGAACTAGCAGCAGAAATCTCTCGTCCGTTAGCCAGTGTTGATGGCCCTAAAACCATTGAGTGGTATCTTCAAAACCTTGATTTACTTGGTTTTGCTGGTCTTGAAATTGGTTTCAATGAGATTCCTGATAGAACAAGAACTATCACGTTTGAATCACAAAATGGCACTAAACTAGAACAGCTTCATAGCTTGATGAACCAGTTTGATGCTGAGTTTGTTTTTCGTACCGATTTAAACCGAGATGGCACTTTGAAAAAGTTTGTCATTGACATCTACCAACGTCCTGACGAAAACCATCACGGTATTGGAAAGGTTCGAGGAGATATAACTCTTTACTATCAAACTGGATTGAAAGGTGTTCAAATATCTAGTGATAAGACTCAACTATTTAACGCTGGGTATTTCGTTGGAAAAGACGGACTAACACTAGGAAGCGTTGTGTTTGAGGAAAAGAATGAGTTAGGACAAGTAGAGTTCTACTCACTTAAAGACAGTCCAATGGTTTACGCACCTTTATCAGCAGATAAATATCCATCAGCAATGGGTGGTGCTAATGAAATAGATAGATGGACACGCAAGGACTTTCAAACAGAGTATGCAGACATCAATTCCCTCAAGGCTTATGCCTTGCGTACTATTAAGCAATATGCTTATCCTCTAATGACATATACCGTAAGTGTTCAATCTAGTTTCTTGGAAAACTACAATGACATCAATCTAGGTGATACGGTTAAGATTATTAATAATAATTTTATAGATGGTCTAGCACTTGAAGCTCGAGTTTCTGAAATGGTTATCAGCTTCGATATGCCACAAAATAATTCGGTCGTTTTTACTAATTTCAGAAAGTTGGATAATAAACCGTCTAGCGAATTACAACAACGTATCGATGAGATTGTTTCTAAGTCACTGCCATATCATGTTGAGATAAGGACAACGAACGGTACAGCGTTTAAAAATGGTGTTGGTCGTTCTACTGTTAAGCCAGTTTTGAAACAAGGCGATAAAATTGTTGATGCAACCTATCGATTTGTGATCGACGGTACTATTAAATATTCTGGTATGACTTACGATATGGTAGCGTCGGATATTACAGAACCAACAACATTGACGGTTGCTGCTTGGGTTGATGATAAAGAAGTAGCTTCAGAAGAAGTTACTTTTTTTAATGTATCAGACGGGAAACATGGCGAAAAAGGAGACATCGGTCCTAAGGGAGCTGACGGAAGAACACAGTACACCCACATAGCTTATGCAAATAGTGCTGACGGTAAGAAAGATTTTTCAACATCTGACTCAAATCGTGAATACATCGGTATATACGTTGATTTTGAAGAATCTGACAGCGTAGACCCATCAAAATATAACTGGACGCTCGTAAAGGGTGCTGACGGTACTCAAGGCGTACCTGGTCCTAAAGGTGCTGACGGACAAACGCCATATTTCCATACAGCATGGTCTTACAGTGCAGATGGTAAGGATAGATTCACTACAATTTATCCGAATTTGAATTTGCTGGATGGTACAAGAGATTTTAGTGGTAATTGGGTTGGAGCATTAGAAGGTGGATCTGACGGAACTTATAAAGGTCTAATTGTTAAAAAACGAATATATCAATGGCAGGGTTTATATAAAGAATTTACTATCCCTAAAGATGGAATATATACTTTCTCAGCATACGTTAAAAGTTCAGGAGACAATGCGAATGTATGTTCATATTTATCTATAAATGGTAGAGACGCTAGTTACCTCATGCCTAGATGGGTCTTAGGAAATAATTTCGACTGGTTTAGAGATAGTTTCTCAGTATCTTTGAAAAAAGGAGACATTGTATATGCTAATTATTATATGGGAGGTAATGCTAAGGATTCAGCTTTATGGACTGCCGGTCATAAATGGGAAGAAGGTTCAGTAGCCACTCCTTGGATGCCTTCAACAAATGAAGTCAAAACTTCTGATTATCCAAGCTATATCGGTCAATACACAAACTATATGGAAGTAGATAGTCCTAATCCGTCCGACTATACTTGGAGTCTCATTCGAGGTAACGATGGAGCACAAGGGCCACAAGGTGAACGAGGTCCACAAGGTCCAAGAGGAGACCAAGGAATACCCGGTCCTAAGGGAGCTGACGGTAAAACACATTACACCCATATTGCTTATGCCGACACTGTTTCTGGTAGTGGTTTTAGTCAAACAGATTTCAATAAACCATACATTGGAATGTACCAAGATTTCAATGAAGTTGATAGTAATAACCCTCAAGACTATCGTTGGACGAAGTGGAAAGGTAGTGATGGTCGTGATGGCATTCCTGGAAAAGCTGGAGCAGACGGACGGACTCCTTACGTCCATTTCGCTTACGCAGATAGTGCAGATGGTCGAAACGGTTTTAGTCTTACTCAGACTGGGACCAAGCGTTATCTAGGTGTACTCACCAACTTCGTCAAAGAAGACAGCACAAATCCAGCAGATTATACATGGAATGATACTGCTGGAAGTATTTCGGTTGGCGGTCGGAACTTACTTGTAAAAACCAATCAAGGTATTACTAATTGGGATTGGACGATGTCGAATGGTGACAAGAGCGTTGAAGAAGTCAATATCGATGGTATTCGTGCTGTTAAATTAACCAAAGGTACAAAAACAGCAAATACTGGTGGGAACTACATTCAATATCAAGGTTTGTTGCGTAAACTCATACGACCAAACACACAGTACACTCTTTCGTTTGATGTAAAACCAAGTGTTGATGTAAGTTTTTCAGCAACGCTAATAAGAGGCAACTACCAAGCTGAATTGACTGATACTGTCCTTATGAATAAAGCTTTGGCAAATCAATGGACTAAAGTATCATGTGTTCTGACAAGTAAAGAAACGTTATCAGGTGATTTAAATCAAGTTGTCTACTTGGCAGGTATGCCAACAACAAACGGTAATTGGTTAATAATCAAGAATATCAAGCTAGAAGAAGGTAATATACCTACTCCATGGACACCAGCCATCGAGGACATACAAGAAGAGATTGATTCCAAAGCCGATGATGTCCTTACGCAAGAACAACTCAACAAGCTGAATGAAATGAATTCTATTGTTAAAGCTGAACTTGCTGCTAAAGCCTCACTTGATACACTTGACCAATGGAAGCAAGCCTATCAAGATTTTGTTAACGCAAATAGCGCAGATCGCGCACAAGCTGAAAAAGATTTAGCTGATGCAAGTGCTCGTGTAACCAAACTAGAAAACGACTTAAAAGATATGTCAGAACGTTGGAATTTCATCGATAGCTACATGACTGCATCAAACGAGGGTCTTGTTGTTGGTAAAACTGATAATTCTAGCTCTATGCTGTTTAGTCCAAACGGTCGTATCTCAATGTTCTCAGCTGGACATGAGGTAATGTATATCTCACAAGGTGTCATTCACATCGAGAATGGTATTTTCTCGAAAACTATTCAAATTGGACGTTATCGTGAAGAACAAGATATTATTAACCCTGACAGAAATGTCATTCGTTATGTAGGAGGTAGTTAA

Genome Context

Tertiary structure

PDB ID

68a32b1604a1a715571c6786472ca0119722b6d8eb32267325d486c977bc8823

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7289

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus	Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T.	2019-05-29	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature