Protein

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Genbank accession
YP_009222932.1 [GenBank]
Protein name
endolysin
RBP type
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSNFAYFISQDGNTKVMMDMTKRVSISLPSSVSQSSNSAGQALSHTSVEGNAIISVEGKVTYSKSTSQEGNLTPPQFQQEIQKARRNRQKFTLYLTTESNPLLQDYKNCVLQNVDISIEEFTDTINVSLVFEQVFVSASAEVTTIQMSPSDQAKLDGASSPTGGTGKGTKTEATEKESGTMAYNAVNGVSGLFGGSTDLSFGGN
Physico‐chemical
properties
protein length:204 AA
molecular weight: 21783,84400 Da
isoelectric point:4,91199
aromaticity:0,06863
hydropathy:-0,38676

Domains

Domains [InterPro]
IPR048494
ATT
18–144
IPR048494
IPR048494
ATT
18–135
IPR048494 DC_2117
YP_009222932.1
1 204
Architecture
ATT
RBD
ATT 18-144 | RBD 145-204
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage eugene 12A10
[NCBI] 		573172 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009222932.1 [NCBI]
Genbank nucleotide accession
NC_029067 [NCBI]
CDS location
range 50065 -> 50679
strand +
CDS
ATGAGTAATTTTGCATATTTTATTTCACAAGATGGAAACACTAAAGTTATGATGGATATGACAAAGAGGGTGAGCATTAGCTTACCTTCCTCCGTCAGTCAATCAAGCAACAGTGCAGGACAAGCACTATCTCATACTTCGGTAGAGGGTAATGCTATCATCTCTGTGGAAGGTAAAGTGACTTACAGTAAGTCTACTTCTCAAGAGGGTAATTTAACCCCTCCACAGTTCCAACAAGAGATCCAAAAGGCTAGGCGTAATCGTCAAAAGTTTACCTTATATCTTACCACAGAAAGTAATCCACTTCTTCAAGACTACAAAAATTGTGTTCTGCAAAATGTAGATATCTCAATCGAAGAGTTTACCGATACTATCAATGTGTCTTTAGTGTTTGAACAAGTTTTTGTTTCAGCTTCCGCAGAAGTAACTACTATCCAAATGTCACCCAGTGATCAAGCTAAACTTGATGGAGCTTCTTCTCCTACAGGAGGTACTGGTAAAGGTACTAAGACCGAAGCTACAGAAAAAGAATCAGGTACTATGGCATATAATGCTGTTAACGGAGTGTCAGGGTTGTTTGGCGGTTCTACGGATTTATCATTCGGAGGTAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0d0388b58a34756d48c64d7bfefc96fabee9a292cebcf341d63aba71d82f88ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7715
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage eugene 12A10 Henn,M.R., Polz,M., Kauffman,A.K., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank