Protein

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Genbank accession
YP_025042.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MEYYFSDRKFNIMGVARTTGKGEWLVSVDSEVKATDDRPSIALTLTIPFKTEQEQAIDEMAAENNFVLYQDEEGNGHQMVIASVTHDTLAHIHTVVCTDAGNDLMNEVVGAYAADKAYTIADYILRFTNDSGWEIGINEFPTDVRTLTWTDEDTALSRIKSVAKHFDAVLSFGFVFVGTTAVKRVINIRHEETSDSLISFEMNKDINNIVKTVDIYDMETSVKAYGATPDGSNDPINLIGYSWTDPTGQFVLDQYGFLHDAIAVQKYSRLLSNNNPNPTQSDWNRVKTFDSTTQATLLQAALADLKKYNHPNVNYEVDLANAPYVPLNQTVHIVDENQNLFLSAKVLSVERSRAGHYTKLTLGDYANEQPNLYSALKDMAVKIENIPKTVQYYPWLRYADDDQGTNMSAFPTGKKYMAIVWSNKSSVPSDNPADYADKWALIKGADGANGKPGPKGADGTSSYLHTAYANSIDGKTDFSVTDASGRSYFGQYVDENQADSTDPTRYLWALFKGADGRDGKDGSDNVPVVTVGPSYPDKPKAGDQHWLTDEDGNVSAFAIFDNTNGWDTKPIAAAALNAETFNGMTFNGVTFNGSTFISSFKGFKPAGFANTVSGKTVIGDGTIVTDAKMDGNDKAAYHNETNQLGFISQYIYDGQVFSSFSAQGGSMVLSSTYAPHGTNVKLTSAFNASDAVYYQHIDSGLETNDVKNMRLGYSRQGPNVTIGIAFEMKTGNGWVRIADIRSGYKPFNNDDAARLLGSMSYTGAACQLYASAGGFYIIPWRGQGSYYGSVNFVTRDDYPIDDAVVI
Physico‐chemical
properties
protein length:806 AA
molecular weight: 88374,67160 Da
isoelectric point:4,78604
aromaticity:0,11290
hydropathy:-0,39107

Domains

Domains [InterPro]
IPR010572
ENZ
117–363
IPR010572
YP_025042.1
1 806
Architecture
ENZ
ENZ 117-363 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage phiAT3
[NCBI] 		279281 Uroviricota > Caudoviricetes > Fattrevirus >
Host Lacticaseibacillus casei
[NCBI] 		1582 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_025042.1 [NCBI]
Genbank nucleotide accession
NC_005893.1 [NCBI]
CDS location
range 16584 -> 19004
strand +
CDS
GTGGAATACTATTTCTCAGACCGAAAATTCAACATCATGGGTGTTGCACGTACAACTGGAAAAGGCGAATGGCTGGTTAGCGTTGATAGTGAAGTAAAAGCAACTGATGATAGGCCTTCCATTGCCTTGACCTTGACGATTCCATTTAAAACTGAGCAAGAGCAGGCCATTGATGAAATGGCGGCTGAAAACAATTTTGTCTTATATCAAGATGAAGAAGGCAATGGGCATCAAATGGTCATTGCCAGTGTTACTCACGATACATTAGCGCATATTCATACAGTCGTTTGTACGGATGCAGGCAATGATCTGATGAATGAAGTGGTGGGCGCCTATGCCGCTGACAAAGCCTATACTATCGCTGATTACATCCTCAGGTTTACAAATGATTCTGGCTGGGAGATCGGTATTAATGAATTTCCTACAGACGTCAGAACACTTACATGGACAGATGAAGACACTGCACTTAGCCGCATTAAATCAGTCGCAAAACATTTTGATGCAGTGCTTAGCTTTGGTTTTGTTTTTGTAGGTACGACTGCCGTAAAACGTGTTATCAATATCAGACATGAGGAAACTTCCGACAGCTTGATTTCCTTTGAGATGAACAAAGACATCAACAATATCGTAAAGACAGTTGATATATACGACATGGAAACCTCGGTGAAGGCCTATGGTGCTACACCTGATGGTTCAAACGATCCAATTAATTTGATTGGGTATAGTTGGACTGATCCAACCGGACAATTTGTACTTGACCAGTACGGATTCTTGCACGATGCCATTGCTGTGCAGAAATATTCACGTTTGTTAAGCAACAACAACCCTAACCCAACACAATCTGATTGGAATCGGGTCAAAACATTTGATTCGACTACTCAGGCCACGTTATTACAAGCAGCCCTAGCAGACCTGAAAAAGTATAACCATCCAAATGTCAACTATGAAGTTGATTTGGCAAATGCGCCCTATGTGCCATTGAATCAAACGGTACACATTGTTGACGAGAACCAGAATCTATTTCTTTCTGCGAAAGTGTTGTCGGTTGAACGCAGCCGCGCTGGTCATTATACCAAGCTCACTTTAGGAGATTACGCAAATGAGCAGCCTAATTTGTATTCAGCGCTTAAGGATATGGCAGTTAAGATTGAAAATATCCCTAAAACCGTTCAATACTATCCTTGGCTTCGTTATGCCGATGATGATCAAGGAACAAATATGAGTGCCTTCCCAACTGGTAAGAAGTATATGGCAATCGTTTGGTCGAACAAGTCGTCAGTCCCGAGTGACAATCCGGCCGATTATGCTGACAAGTGGGCACTGATTAAGGGAGCGGATGGTGCTAACGGTAAACCGGGGCCTAAAGGTGCCGACGGTACCAGCAGCTATCTTCATACTGCGTATGCTAATAGCATCGATGGTAAAACTGATTTTTCAGTAACAGACGCTAGCGGCAGATCTTACTTCGGGCAGTACGTTGACGAAAATCAAGCTGACAGTACCGACCCGACACGCTACTTGTGGGCATTATTTAAAGGCGCCGATGGGCGCGATGGTAAAGACGGTAGTGACAATGTTCCAGTTGTGACGGTTGGCCCGAGTTATCCTGATAAGCCAAAGGCCGGCGACCAGCACTGGCTAACTGATGAGGACGGCAATGTTTCCGCTTTTGCTATTTTTGATAACACAAACGGGTGGGACACAAAGCCAATTGCCGCGGCAGCGTTAAATGCCGAAACTTTTAATGGTATGACTTTCAATGGGGTAACTTTTAACGGTTCTACTTTTATCTCGTCTTTTAAGGGTTTCAAGCCTGCCGGATTTGCCAATACAGTCAGTGGGAAAACCGTCATTGGCGATGGAACCATTGTTACAGATGCCAAGATGGACGGTAACGACAAGGCAGCGTATCACAATGAGACTAACCAATTGGGCTTCATTTCGCAATATATATATGATGGTCAAGTATTCAGTTCGTTCAGCGCTCAGGGCGGCAGCATGGTGTTGTCTTCCACGTATGCCCCGCATGGAACGAACGTTAAGCTGACATCGGCTTTCAACGCTTCGGATGCTGTCTACTATCAACACATTGACAGCGGACTTGAAACCAATGATGTTAAAAACATGAGACTTGGATATTCGAGGCAAGGCCCTAACGTTACCATTGGGATTGCTTTTGAAATGAAAACTGGCAATGGATGGGTCAGAATTGCCGACATTCGATCGGGGTACAAACCATTTAACAATGACGATGCAGCAAGGCTACTTGGGAGCATGTCATATACAGGGGCGGCCTGTCAATTGTATGCTTCGGCAGGGGGATTTTACATCATTCCATGGCGTGGGCAAGGCTCCTATTATGGAAGCGTAAACTTTGTCACTCGAGACGATTATCCGATTGATGATGCGGTGGTGATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
331e9b6f2c95092c18e3c93d93476a25a78e778df72d175ee393a7061624e044
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7842
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequence of the temperate bacteriophage PhiAT3 isolated from Lactobacillus casei ATCC 393 Lo,T.C., Shih,T.C., Lin,C.F., Chen,H.W. and Lin,T.H. 2005 15975621 GenBank