Protein

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Genbank accession
WKM80519.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MANKPTQPIFPLGLETAEQSKLAGVLNTGVIEHGPDAVMTVPEGNAVDGLPSAVRYNATSDEFEGFYEEGGWLPLGGGGIRWEALSPAPSHVLEEGRGYLINNSSAVSTVVLPSPSKIGDSVTICDAFGKFSTYPLTINGNGNLVYGSNEMMAISTDNVAATFTWSGAERGWIITAGVGLGQGRVYSREIFTQVLTSTTTQVTLAVQPLIVDVFVDGKRLSEGKYSLDGFNVNFSPSLASGVELQVVEYTPIQLGIYAFQDFAHTLASTNGASLVGTSSGNTVQEVLNSHSGSFQTGVKLLSSNDLIVDKSVTPNQLYRWDGEFPKTVEPGSTPATTGGVGLGAWLSVGDASLRAHLETQGVLNFDHSIDYEDGSVGDYLKNIVYPTDAPFYAPTDGVTDATLALQNAIIHCENKNSKLCINGIFSVSDSLTISSAINVFALNSDCGVISSAPAGHAAVIFNGDNICWNGGFIRGLNQPSSPTVRQDGILLNGNDCVLENVSISGFFAKGLHTSNADGGGVGIRDYGTRNTISKCRVEYNKFGISLEGKDGWVLGNYVSNHYRMSSEAKPWDDTSNYWDGIVGGGEWLGVATGYLIDGNEFEDNGQSGIYAGGNGGIFAKNRITNNHIHGNWNRGIDFGVVQRLANSDVYENIITDNIVYNNRAANIWLAGVRDSIINNNNSWFTDDYRAMFAGHFDSCVCLTLADGGEKAAPTGNQVNGNRCKTLESDDQIIGFTLNITDTARGNQVRDNVLSPTGQTYIPNPELYAVNNIDIPTEFAFTPQLIGGSGVTLGNSSGKLTANGNVFSLSLSILAQSVSSPSGSLTIGYIPGLSGSSVRHHNVRTEFYNNLNTTMQRSQPYVNIGDSADQLRVYRLADGLAKDDLLEYFMANSDLRMVGDIEIVPYNFSRSVTIVGHSFCTSDVMSTELNRLLGTDIYNFSRAGSSDVEVAMSQEAITRQYSAIGGAIPASGPVTLYPPETGIFWYGASGKCTYAGINGTFSTVLSNPSTGETSLVFTRDVAGSAVSVPVAATFAMRPYTRFNTNTIPAGRKHSLHRDDICIIWGGRNSTDYSRYLTELQQMVANMNTRRFVICPEFPYDTETTGTTGAINLATLNSNIQAAFPDNYCQIGGVDLLQNFKSKYNPSYAGDVTDIANGITPRSLRADNLHPSETLQANALYVGASVNASFIAQFIKSKGWGI
Physico‐chemical
properties
protein length:1200 AA
molecular weight: 128402,20630 Da
isoelectric point:4,83338
aromaticity:0,09250
hydropathy:-0,14025

Domains

Domains [InterPro]
DC_1064
ATT
4–188
DC_1064 IPR040775 IPR012334
DC_1596
STR
185–563
DC_1596 IPR006626 IPR006626 IPR006626 DC_1569
G3DSA:2.10.10.80
ATT
288–359
G3DSA:2.10.10.80 IPR011050
IPR006626
Unmapped
493–525
IPR006626 IPR006626
WKM80519.1
1 1200
Architecture
ATT
STR
ATT
STR
ATT 4-188 | STR 189-287 | ATT 288-359 | STR 360-1200
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WKM80519.1
1 1200
Domain Start End Length (AA) Confidence
N-terminal 1 400 400 0,9925
Central domain 401 776 377 0,9934
C-terminal 777 1200 423 0,6549
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-400
Central
401-776
C-terminal
777-1200

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SW16-7
[NCBI] 		3062021 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Weltevreden
[NCBI] 		57743 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WKM80519.1 [NCBI]
Genbank nucleotide accession
OR228402.1 [NCBI]
CDS location
range 138646 -> 142248
strand -
CDS
ATGGCTAACAAACCAACACAGCCGATTTTCCCTCTCGGGCTTGAAACTGCTGAGCAATCTAAACTGGCTGGTGTCCTCAACACTGGCGTCATTGAACATGGACCGGATGCAGTTATGACCGTGCCCGAGGGGAATGCCGTTGATGGCCTCCCTTCCGCTGTTCGATACAACGCCACATCAGATGAATTCGAAGGGTTTTACGAAGAAGGCGGGTGGTTGCCTCTGGGTGGCGGCGGCATACGCTGGGAAGCACTCTCTCCGGCACCGTCTCATGTTCTGGAAGAAGGTCGCGGCTATCTCATCAACAACTCCAGCGCGGTATCTACGGTGGTTCTCCCTTCCCCCTCCAAGATCGGTGATTCTGTTACTATTTGTGACGCTTTCGGGAAGTTCTCAACCTACCCGCTAACAATTAACGGTAACGGGAATCTGGTGTATGGCTCCAATGAGATGATGGCCATATCTACTGATAACGTGGCGGCGACTTTTACCTGGTCAGGTGCTGAACGCGGGTGGATTATCACTGCTGGTGTTGGATTGGGGCAAGGTCGTGTCTACAGTCGTGAGATCTTCACTCAGGTTCTCACATCCACGACCACCCAGGTTACTTTGGCGGTACAACCACTGATTGTGGACGTGTTTGTGGACGGCAAACGTTTGTCTGAAGGCAAATATTCTCTGGACGGGTTTAACGTCAATTTCTCACCTTCTCTTGCGTCCGGTGTGGAATTACAGGTGGTGGAATATACGCCTATTCAGCTGGGTATCTATGCCTTCCAAGACTTCGCTCATACCCTGGCTTCCACTAATGGTGCAAGTTTGGTGGGGACTTCTTCAGGTAACACCGTTCAAGAAGTTCTTAATTCACATTCTGGCTCTTTCCAGACTGGGGTAAAACTCCTTAGTTCTAATGACCTAATCGTGGATAAGTCTGTTACTCCTAATCAACTTTACCGATGGGACGGTGAGTTTCCTAAAACTGTAGAGCCTGGCTCAACCCCAGCAACAACTGGTGGCGTTGGTTTAGGTGCATGGTTGAGTGTTGGTGATGCTTCTCTGCGTGCACACCTTGAAACACAAGGTGTGCTTAATTTTGATCACAGCATTGATTACGAAGATGGTTCAGTCGGTGATTATTTAAAAAATATCGTTTACCCAACCGACGCACCATTTTATGCACCAACTGATGGTGTTACTGATGCCACCCTGGCTCTTCAAAATGCAATTATTCATTGTGAAAATAAAAATTCCAAACTATGTATTAATGGAATTTTTTCAGTTTCTGATAGCCTTACAATTTCATCAGCAATTAATGTATTTGCATTGAACTCCGATTGTGGTGTCATTTCATCAGCACCGGCCGGGCATGCTGCTGTTATTTTTAATGGAGATAATATTTGCTGGAATGGTGGTTTTATTCGTGGTTTAAATCAACCCAGTAGTCCCACGGTAAGACAAGATGGCATCCTACTTAATGGGAATGATTGTGTTTTAGAGAATGTCTCTATCAGTGGTTTCTTCGCGAAAGGTTTACATACCTCTAATGCAGATGGGGGCGGTGTTGGCATCCGGGACTATGGTACGCGAAATACCATCAGTAAGTGCCGGGTAGAATATAATAAATTCGGTATATCTCTCGAAGGTAAAGACGGTTGGGTACTCGGAAACTATGTGAGTAACCATTACCGAATGTCTTCTGAAGCCAAGCCGTGGGACGATACCAGTAACTACTGGGATGGTATTGTTGGCGGCGGTGAATGGCTTGGCGTTGCAACCGGATATCTGATTGATGGTAATGAGTTTGAGGATAATGGTCAGAGTGGTATCTATGCTGGGGGCAACGGGGGGATTTTCGCCAAGAACAGGATTACTAATAACCATATACATGGAAACTGGAATCGCGGTATAGATTTTGGGGTTGTACAGCGTCTTGCTAATAGTGATGTTTATGAAAATATAATCACCGACAACATAGTGTATAACAACCGAGCGGCTAACATATGGTTAGCTGGCGTTCGGGATAGCATAATAAATAACAATAACTCCTGGTTTACTGATGATTATAGGGCTATGTTCGCTGGGCATTTTGATTCCTGCGTGTGCCTGACGTTAGCAGACGGCGGTGAAAAAGCAGCGCCAACCGGTAATCAGGTAAACGGCAACCGGTGTAAGACCCTAGAATCTGATGATCAGATTATCGGTTTTACGTTAAACATTACAGACACTGCCAGAGGAAACCAGGTCCGGGATAATGTGTTATCCCCCACAGGGCAGACGTATATTCCAAATCCAGAACTATATGCTGTTAATAATATCGATATCCCTACTGAGTTCGCATTCACACCGCAACTCATAGGCGGGTCAGGTGTGACACTGGGTAACAGTTCTGGAAAGTTAACCGCTAACGGAAATGTGTTTAGCCTAAGTTTATCTATCTTGGCCCAGTCTGTCTCATCCCCAAGCGGAAGCCTGACAATAGGGTATATACCGGGGCTTAGTGGTTCTAGTGTTCGCCATCACAACGTACGAACGGAGTTCTATAATAACCTGAATACTACAATGCAACGGTCGCAGCCATACGTAAATATCGGTGATAGCGCGGACCAATTGCGTGTATACAGACTTGCTGATGGATTAGCTAAAGATGATTTACTAGAGTATTTTATGGCTAATTCTGATCTACGTATGGTTGGTGATATTGAAATAGTTCCATATAACTTTAGCCGTTCAGTGACCATAGTTGGGCATAGCTTCTGCACCAGTGATGTTATGAGCACAGAGTTGAATCGTTTACTTGGTACTGATATATACAACTTCTCCAGGGCAGGGTCTAGCGATGTTGAAGTGGCTATGTCACAAGAAGCGATTACACGTCAGTATTCTGCTATCGGTGGCGCTATTCCCGCCAGTGGCCCGGTAACGCTTTACCCTCCAGAAACAGGAATATTCTGGTATGGCGCTTCTGGTAAATGCACTTATGCTGGTATCAATGGTACATTTTCAACAGTGCTATCAAACCCATCAACAGGTGAAACGAGTCTGGTGTTCACTAGGGACGTTGCTGGTTCAGCTGTCTCAGTTCCTGTAGCTGCCACATTCGCTATGCGCCCATATACACGATTTAATACAAACACTATCCCGGCAGGGCGTAAGCATTCACTGCATAGAGACGATATTTGCATCATATGGGGCGGAAGGAATTCAACTGACTACAGCCGATACCTAACTGAGTTGCAGCAGATGGTTGCCAACATGAACACCAGGCGATTTGTTATTTGTCCAGAATTCCCATACGACACCGAAACTACTGGAACAACTGGAGCTATAAATCTTGCTACTCTCAATAGCAATATCCAGGCAGCATTCCCTGATAACTATTGCCAGATAGGTGGAGTTGATTTATTGCAGAACTTTAAAAGCAAATATAACCCATCATATGCAGGAGATGTAACTGATATTGCTAACGGTATAACACCGCGATCCCTGCGTGCAGATAACCTGCATCCGTCAGAGACGCTTCAGGCCAATGCCCTATATGTAGGCGCATCAGTTAACGCATCATTTATTGCTCAGTTCATTAAAAGCAAAGGATGGGGCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cdd7abb2cd37ce15b85303cbe2a90830435836f896c9aad9966910db28b7293f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7258
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
SW16-7, a novel Ackermannviridae bacteriophage with highly effective lytic activity targets Salmonella enterica serovar Weltevreden Xu,J., Li,J., Yan,Y. and Li,X. — — GenBank