Protein

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Genbank accession
QYW02748.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAGFKQTLKEHRPVSLITFDGDQFDPILRTSLANPPVILDESQYQNNAIIMNEQPDFPGYRMGMSSLVGLEQTDQYAMAFGYNGYNALNPSGWTKTLLQVPHNAALGFPQNNGSFTLSFIYYRDQDENAGWRETRRLNGQSYTDTLQRPIMRKAGVFDIWWEDYWSSQHVVALTGPDNKRINIRNDTLDGASQASSASRFYKRNLLFTCVYDCALTSPGVYTCNWIIYINGRERARTTWTALDTPPVVNAVSPVEIGGRINSAAVHNDRNTSFVMLDQIGIFNKAFTPNEVAWTWKKMLAYDDMIHASYPVNFWTMGDADSNTSFAMVDSTRSTSNRPGVYIGGNQLAIRGRAGPPRLGGSAVTFVNGGMAAVHATSGGYQTIFDPSGDYTVEMWVNFSSPNRGVIFSNQRDDMPFPGMLLECNRRNNQDYPGGLQFSVNSTVSVSSLQYTPENAPYHFGDGQFHHVVLIRRGTNIELWIDSIRHAVADTPIARVSSPGPGQLYMMSMMPGQLFVNGTMSYLITYDYALQAQEIRARYSYRYLYRIQGNVTLQGTPHRADIRVMNTLTGDLIAKTVSDQSTGAYSINLYDNTLLDLYALNIQDPNVRYRIYGPIRPAELEDPAQ
Physico‐chemical
properties
protein length:624 AA
molecular weight: 69951,67520 Da
isoelectric point:6,02069
aromaticity:0,11378
hydropathy:-0,36699

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
23–296
G3DSA:2.60.120.200 G3DSA:2.60.120.200
G3DSA:2.60.120.200
STR
23–295
G3DSA:2.60.120.200 DC_1745
IPR013320
STR
36–294
IPR013320 IPR013320
PF13385
LEC
384–534
PF13385
QYW02748.1
1 624
Architecture
STR
STR
RBD
STR 23-296 | STR 371-555 | RBD 556-613 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYW02748.1
1 624
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,6081
Central domain 11 209 200 0,5342
C-terminal 210 624 414 0,5410
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-624

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage Marzo
[NCBI] 		2859652 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW02748.1 [NCBI]
Genbank nucleotide accession
MZ326868 [NCBI]
CDS location
range 123745 -> 125619
strand +
CDS
ATGGCAGGCTTCAAACAAACCTTGAAAGAACATCGTCCAGTCTCGTTGATCACGTTCGACGGCGACCAGTTCGACCCTATCCTGCGTACCTCGCTAGCCAATCCTCCAGTGATCCTGGACGAATCGCAGTATCAGAACAACGCGATCATCATGAACGAGCAGCCCGACTTCCCCGGCTACCGCATGGGTATGTCATCGCTTGTCGGGCTTGAACAGACCGACCAATACGCTATGGCGTTCGGTTACAACGGCTACAATGCTCTGAACCCAAGCGGATGGACCAAGACTCTGCTGCAGGTGCCACACAATGCAGCGCTAGGCTTCCCCCAGAACAATGGCTCGTTCACCCTATCGTTCATCTACTACCGTGATCAGGATGAGAACGCGGGCTGGCGCGAAACGCGACGCCTGAATGGTCAATCCTACACTGATACTCTTCAGCGACCGATCATGCGCAAGGCTGGTGTGTTCGACATTTGGTGGGAGGACTATTGGTCATCTCAGCACGTCGTGGCCTTGACTGGACCCGACAACAAGCGAATCAACATCCGAAACGACACGCTTGACGGTGCATCTCAGGCATCATCGGCTAGCCGTTTCTACAAGCGCAATCTCCTGTTCACTTGCGTCTACGATTGCGCATTGACCAGCCCAGGTGTCTACACTTGCAACTGGATCATCTACATCAATGGCAGAGAGCGTGCTCGCACCACTTGGACGGCGCTTGATACGCCACCTGTGGTCAATGCTGTGTCTCCTGTCGAGATCGGTGGACGCATCAACTCAGCCGCTGTCCACAATGACCGCAATACCTCGTTCGTGATGCTGGATCAGATCGGCATCTTCAACAAGGCGTTCACGCCGAATGAGGTAGCTTGGACGTGGAAGAAGATGCTGGCTTACGACGACATGATCCACGCCTCATATCCGGTCAATTTCTGGACAATGGGCGACGCTGATAGCAACACCTCGTTTGCGATGGTGGACAGCACTCGCTCGACGTCCAACAGACCTGGCGTCTACATCGGTGGTAATCAGTTGGCGATCCGCGGTCGAGCTGGTCCTCCACGTCTTGGCGGTTCGGCGGTCACGTTCGTCAATGGTGGCATGGCAGCTGTCCACGCTACATCTGGCGGCTATCAGACAATCTTCGATCCATCTGGCGACTATACTGTCGAGATGTGGGTGAACTTCTCCAGCCCGAACCGTGGAGTCATCTTCTCGAACCAACGAGATGATATGCCGTTCCCGGGAATGCTGCTGGAATGCAATCGTCGCAACAATCAAGACTATCCAGGCGGCTTGCAGTTCTCGGTCAACTCAACGGTCTCAGTTAGCTCGCTGCAGTACACACCTGAGAATGCACCCTATCACTTCGGTGATGGACAGTTCCATCATGTGGTATTGATCAGGCGAGGCACGAACATCGAGCTATGGATTGACTCTATCCGACACGCTGTAGCCGACACTCCCATCGCTCGCGTTTCAAGCCCAGGTCCGGGTCAGCTGTATATGATGAGTATGATGCCGGGTCAGCTGTTCGTCAATGGCACGATGAGCTATCTCATCACCTATGACTACGCTCTGCAGGCTCAAGAGATCAGGGCTCGCTACAGCTACCGATACTTGTACAGAATCCAGGGCAACGTGACACTTCAGGGTACACCGCACAGGGCTGATATCCGTGTGATGAACACCTTGACAGGTGATCTGATTGCAAAGACTGTGAGTGACCAATCAACGGGCGCTTACTCGATCAACCTATATGATAACACGCTTCTCGATCTGTACGCTCTAAATATCCAGGACCCGAACGTCCGCTACCGCATCTACGGACCGATTCGACCAGCAGAACTTGAGGATCCAGCACAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
96be4d198980b39014b2be2f58e1a1f91fff0192cb2e1cfe16ce96d88e41b2a8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7414
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Stenotrophomonas maltophilia phage Marzo Patel,J., Godoy,B., Clark,J., Liu,M. and Young,R. 2022-03-17 — GenBank