Protein

View in Explore

Genbank accession

YP_010682698.1 [GenBank]

Protein name

tail fiber protein and host specificity

RBP type

Evidence Phold

Probability 1,00

Protein sequence

MLLTIHDNNLQKVAYIDNDKQSTLNFFNDKWTRSLESGTSVFEFSVFKKSITSNYNVETAYKYLNERAFVSFKYKGRSYLFNVMKVEEDENIIRCYCENLSLELLLEYRGAYKASKPMTFKEYFDDWGMERFAKLTLGVNEVSDQKRTLEWEGQETTLARLISLARNFDAEIEFETKLQPNSQLDAFILNVYKAHDGINQGVGRRRSDVFLKYGKNIKGIKRSVDKTQVYNLITPYGRKDDTKKETKRISDPVTIQNPVVVPSARVEKRYAGGDLTYAGHTLSASLVQTIFNLCVQRNLLPSGVISQLYLESFWGSSNVARRDNNWSGMTGGAQTRPSGVVVTTGSPRPASEGGTYMHYASVDDFMKDYTYLLAEQTSGGRKMYGVKGKQNIEEYTKGLFRIGGALYDYAAAGYNHYIYLMRDIRSGINRSNGNILDKLDDLWRQPDNQVTQPNQPITRTVKAEKVIAVLNEMQGLKGRRVGNGQCYALAAWYSMKLGGPGLGAGVTGKSGVIGAGMAAAKIGTDYAWDRFGWSVIRPTSVDQLKPGALANIKAYNSFLGTTVWGHNSIIIANNGSTVTVLEQNYAGRQYVVQNSYPASAYLGAIETLCYPPELREGKTVEGRTETVSSPNFEVQKVEIPPIDVEVTSESTAALTIDSKRKQEWKNDKGQVEFYLENGSLYAPISKELYPSILTGKENDDNWIRKDMEIDTDSEDVLISTALRNLRKFCYPAITYEVDGFLDLDIGDTVKIQDDGFKPMLILEARVSEQEISFSNPVENKTVFANFQALQNKVSDSLLSRMAKLAEQAIPYELKLSTDKGTTFKNSIGQSVLKATLEKNGEVYQPIFFYKNGDSIIGTGNQLVVKPTDFENTLQVTVEAYLDDELVATAEVTFTDVSDGKQGPKGDRGNDGIAGKDGVGLKTTTITYGISDSDTVMPNNWSSQVPTLVKGKYLWTKTQWTYTDGSSETGYQKTYIAKDGNKGNDGLPGKDGVGIRNTTITYAVGTSGTVAPTSGWSSQVPNVKEGQYLWTKTVWDYTDGTSEQGFSVAKMGEQGPKGDRGNDGLPGKDGVGLKTTTIIYGISDSDIAMPKNWSSQVPTLVKGKYLWTKTTWTYTDNSSETGYQKTYIAKDGNDGNDGLPGKDGVGLVDTTIEYLKHTDGQIAPNPKYYSSFNWKGLTLSQHLEHDWVNDLTLIKSGKPVKYTDLKVGELVIDRTGEIFPIKEIFGTEGDSSNPGYINLKPSIGKWSKDIPTVNPGEYLWTRTTWFYSDGTSEQGFSVAKMGEQGPKGDRGEQGPKGDQGIPGPKGADGRTQYTHIAYADTVSGSGFSQTDSNKSYIGMYQDFNAEDSNNPQDYRWSKWKGSDGKDGIPGKAGADGRTPYVHFAYADSADGRTGFSLTQTGRKRYLGVLTNFFKEDSTNPSDYTWNDTAGSISVGGDNLIINSAFPKNLDNWGFWETGLPNKNLHIATHDFYYNDTKNLFRLDSDGKGVPASSRRFPVKRNTDYSLNIQTFATWNIKGVTIYFLGRKANETDKTFTKVVHVKTYSGSPSVTQAVKWHLIFNSGDCDEGFIRIDNNGATDGKTSMLFFAELDCYEGTTDRVWQASTKDLEEEMETKADAAMTIEQINALNERAGIIKAEMEAKASAEILNNWIKNYQDFVKANETERAAAEKALVSSSQRVSTIAKDLGELSDRWNFIDTYMSSSNDGLVIGKNDGSSSMMFNPNGRISMYSAGEEVMYISQGVIHIENGIFSKTIQVGRYREEQYHLNPDMNVIRYVGGF

Physico‐chemical properties

protein length:	1779 AA
molecular weight:	197504,11510 Da
isoelectric point:	5,62674
aromaticity:	0,10512
hydropathy:	-0,55351

Domains

Domains [InterPro]

DC_0558
ATT
1–398

DC_0558 G3DSA:3.90.1720.60 PTHR24637

IPR010572
ENZ
141–245

IPR010572 IPR002901 IPR007921 G3DSA:1.20.5.320

G3DSA:1.10.530.10
RBD
296–397

G3DSA:1.10.530.10 DC_0255

IPR002901
ENZ
296–403

IPR002901

G3DSA:2.10.70.40
Unmapped
316–360

G3DSA:2.10.70.40

YP_010682698.1

1 1779

Architecture

ATT

ENZ

STR

ATT 1-398 | ENZ 399-408 | STR 409-1779

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0558	ATT	DC_0558	1	398	Novel HMM	DC_0558	N-terminal	Low	Positional only	70 proteins / 70 hits
IPR010572	ENZ	DC_0675	141	245	InterPro cluster	Tail spike domain	Central	High	Text match	419 proteins / 419 hits
IPR002901	ENZ	DC_0048	274	415	InterPro cluster	Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain	Central	High	Text match	76 proteins / 112 hits
G3DSA:1.10.530.10	RBD	G3DSA:1.10.530.10	296	397	Merged direct domain	G3DSA:1.10.530.10	C-terminal	Low	Positional only	95 proteins / 95 hits
IPR002901	ENZ	DC_0048	296	403	InterPro cluster	Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain	Central	High	Text match	76 proteins / 112 hits
G3DSA:2.10.70.40	Unmapped	-	316	360	Gene3D	peptidoglycan hydrolase	-	-	-	-
G3DSA:3.90.1720.60	STR	G3DSA:3.90.1720.60	409	610	Merged direct domain	G3DSA:3.90.1720.60	Central	Low	Positional only	18 proteins / 18 hits
IPR007921	ENZ	DC_0404	461	612	InterPro cluster	CHAP domain	C-terminal	High	Text match	2 proteins / 2 hits
DC_0255	STR	DC_0255	540	1779	Novel HMM	DC_0255	Central	Low	Positional only	32 proteins / 32 hits
PTHR24637	Unmapped	-	1225	1376	PANTHER	COLLAGEN	-	-	-	-
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	1281	1333	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Streptococcus phage CHPC640 [NCBI]	2365037	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Streptococcus thermophilus [NCBI]	1308	cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Genbank protein accession

YP_010682698.1 [NCBI]

Genbank nucleotide accession

NC_071068.1 [NCBI]

CDS location

range 15576 -> 20915
strand +

CDS

ATGTTATTAACGATTCATGACAATAATCTACAAAAAGTAGCTTATATAGATAACGACAAACAGTCTACTTTAAACTTCTTCAACGATAAATGGACTCGTTCGCTTGAAAGCGGAACATCAGTTTTTGAGTTTTCGGTTTTCAAGAAAAGCATTACATCTAACTATAATGTAGAAACTGCTTATAAATATCTTAATGAGAGAGCTTTTGTCAGCTTTAAATACAAGGGGCGCTCATACCTTTTTAATGTCATGAAGGTTGAAGAAGATGAGAACATCATCAGGTGCTACTGTGAAAACTTGAGCCTTGAATTACTATTAGAGTATCGAGGTGCTTATAAAGCATCAAAACCTATGACATTCAAAGAGTATTTTGATGATTGGGGAATGGAACGATTCGCCAAATTGACTCTTGGTGTCAACGAGGTTTCTGATCAAAAGAGAACTCTAGAGTGGGAAGGACAAGAAACTACTCTTGCCCGACTGATTTCACTAGCCCGAAACTTCGATGCTGAAATTGAATTTGAGACAAAGTTACAACCAAACAGCCAACTTGATGCATTCATCTTAAACGTTTACAAAGCTCATGATGGTATAAATCAAGGTGTTGGTCGCAGACGTTCGGATGTCTTTTTGAAATATGGAAAAAACATAAAAGGCATTAAGCGTAGTGTTGATAAGACTCAGGTTTATAATCTTATAACGCCTTATGGACGAAAAGATGATACTAAAAAAGAGACCAAGAGAATATCTGATCCAGTTACTATTCAAAATCCAGTTGTAGTTCCATCGGCTAGAGTTGAAAAAAGATACGCTGGAGGTGACTTGACTTATGCAGGACACACGTTAAGTGCTAGTTTGGTGCAAACCATTTTTAATCTATGTGTTCAGCGAAACCTTTTGCCATCAGGCGTCATATCTCAGCTCTATCTTGAGTCCTTTTGGGGTTCATCTAATGTAGCAAGACGTGATAATAACTGGAGTGGTATGACTGGTGGTGCACAAACGCGTCCATCTGGTGTCGTTGTAACCACGGGTAGTCCTAGACCAGCTAGCGAGGGCGGAACGTATATGCACTATGCTAGCGTTGATGATTTTATGAAAGACTACACTTATCTACTCGCAGAGCAGACAAGTGGTGGTCGCAAGATGTACGGTGTCAAAGGCAAGCAGAACATCGAAGAATACACAAAGGGGCTCTTCCGAATTGGAGGAGCTCTTTACGACTACGCTGCGGCTGGATACAACCACTATATCTATCTTATGCGAGATATCCGAAGCGGCATCAATCGTTCGAACGGTAACATTCTTGATAAACTAGATGATTTGTGGAGGCAGCCAGATAATCAAGTTACCCAACCTAACCAACCAATAACGAGAACTGTTAAGGCTGAGAAAGTTATCGCCGTCCTAAACGAAATGCAAGGTTTGAAAGGTCGTAGAGTAGGTAACGGTCAATGTTATGCATTAGCAGCTTGGTATTCTATGAAACTAGGTGGCCCAGGTCTCGGTGCTGGGGTTACTGGCAAGTCTGGTGTAATTGGTGCTGGTATGGCTGCAGCAAAGATTGGTACTGACTACGCTTGGGACAGATTTGGCTGGAGTGTCATCAGACCTACCAGCGTTGACCAATTAAAACCTGGGGCTCTCGCTAATATAAAGGCATACAACTCATTTCTAGGTACGACTGTTTGGGGACATAATTCAATTATCATCGCTAACAACGGTAGCACAGTTACTGTTTTAGAACAAAACTACGCAGGTCGGCAATACGTTGTCCAAAATAGCTATCCTGCCAGTGCTTATTTAGGCGCTATTGAGACACTATGTTATCCTCCCGAATTGAGAGAAGGGAAAACTGTTGAGGGTAGAACTGAAACTGTTAGCTCTCCAAACTTTGAAGTGCAAAAGGTAGAGATTCCACCTATCGACGTTGAAGTAACCTCTGAAAGCACAGCTGCACTCACTATTGATAGCAAGCGAAAGCAAGAATGGAAGAACGATAAAGGTCAAGTTGAATTTTACCTTGAAAACGGTTCGCTATATGCTCCTATTTCTAAAGAGCTATACCCATCCATTCTAACAGGTAAAGAAAACGACGATAACTGGATACGTAAGGATATGGAAATTGACACGGATAGCGAAGATGTGCTGATTTCGACAGCTCTTAGAAATCTACGCAAATTCTGTTATCCAGCTATTACCTATGAAGTCGATGGTTTCCTTGATTTAGATATTGGTGACACAGTTAAAATTCAAGACGACGGTTTCAAGCCTATGCTTATTCTTGAAGCTCGTGTCAGCGAACAAGAGATTAGTTTCTCTAATCCAGTAGAGAACAAAACAGTGTTTGCTAACTTCCAAGCACTTCAAAACAAGGTTTCAGACAGTTTGCTATCACGCATGGCTAAACTAGCTGAGCAAGCCATTCCTTACGAGTTGAAACTTTCAACTGATAAAGGTACTACGTTTAAAAATAGTATTGGTCAAAGCGTGCTAAAAGCAACACTTGAAAAAAACGGTGAAGTTTATCAACCAATATTCTTCTATAAAAATGGTGATTCCATTATCGGTACTGGCAATCAGTTAGTTGTTAAACCAACAGATTTTGAAAACACCCTACAAGTTACCGTTGAAGCATACCTTGATGATGAGTTAGTAGCAACTGCAGAGGTTACATTCACTGATGTATCAGATGGGAAACAAGGTCCTAAAGGCGACCGTGGTAATGACGGTATTGCAGGCAAAGACGGTGTTGGATTAAAAACCACAACTATCACTTATGGGATTAGCGATAGTGACACTGTGATGCCTAATAACTGGTCTAGTCAAGTACCAACATTGGTTAAAGGCAAATATCTTTGGACTAAAACACAATGGACATACACTGATGGTTCCTCTGAGACTGGGTATCAGAAAACCTACATTGCCAAGGATGGTAATAAAGGGAATGATGGACTACCCGGCAAGGACGGAGTTGGTATTCGTAATACGACCATTACTTACGCAGTCGGAACATCTGGGACAGTAGCGCCAACGTCTGGTTGGAGTAGTCAAGTTCCTAACGTTAAAGAAGGACAATATCTATGGACTAAGACTGTTTGGGACTATACCGACGGTACGAGTGAGCAAGGTTTTTCCGTTGCTAAGATGGGTGAACAAGGACCTAAAGGAGATAGAGGTAATGACGGCTTACCTGGTAAGGATGGTGTTGGATTAAAGACCACAACTATCATTTATGGCATAAGCGATAGTGACATTGCTATGCCTAAAAACTGGTCTAGTCAGGTGCCTACTTTAGTTAAAGGTAAATACCTTTGGACTAAAACCACTTGGACATACACTGATAATTCATCTGAAACAGGCTATCAAAAAACTTACATTGCCAAAGATGGTAACGATGGAAATGATGGCTTGCCAGGTAAGGATGGAGTCGGTCTAGTTGATACTACAATCGAGTATCTAAAACACACAGATGGTCAGATAGCACCTAATCCAAAATACTACTCAAGTTTTAATTGGAAAGGTTTAACATTATCTCAACATTTAGAGCATGATTGGGTTAATGACCTGACACTTATCAAGAGTGGTAAACCTGTCAAATACACTGACTTAAAAGTCGGTGAGCTTGTAATTGATAGAACCGGTGAAATTTTCCCTATCAAAGAAATCTTTGGGACTGAAGGAGATAGCAGTAACCCAGGATACATTAATCTAAAACCTTCAATTGGAAAATGGAGTAAAGATATTCCAACAGTTAATCCCGGGGAATATCTCTGGACAAGGACTACGTGGTTCTATTCAGACGGTACGAGTGAGCAAGGTTTTTCGGTCGCTAAAATGGGCGAGCAAGGGCCAAAGGGTGACCGTGGGGAACAAGGGCCAAAGGGAGATCAAGGTATTCCAGGTCCTAAAGGTGCAGATGGAAGAACACAGTATACACATATAGCTTACGCTGATACTGTTTCAGGTAGTGGCTTCAGTCAAACCGATAGCAATAAGTCGTATATTGGCATGTATCAAGACTTCAATGCCGAAGATAGCAACAATCCTCAAGACTATCGTTGGTCTAAATGGAAAGGTAGCGATGGTAAAGATGGGATTCCTGGTAAGGCTGGGGCGGACGGAAGAACACCTTACGTCCATTTCGCTTATGCAGACAGTGCCGATGGTAGAACTGGTTTCAGTTTAACTCAGACTGGACGTAAGCGTTACTTGGGTGTACTTACCAACTTCTTCAAGGAAGACAGTACTAATCCTTCTGACTACACGTGGAATGACACTGCGGGTAGTATATCTGTTGGTGGAGATAATCTAATCATTAACTCGGCTTTCCCAAAGAATCTTGATAATTGGGGATTTTGGGAAACGGGATTGCCTAATAAAAATCTTCATATAGCAACACATGATTTTTATTACAATGATACAAAAAATCTATTTAGACTAGATAGTGATGGTAAAGGGGTTCCTGCATCATCAAGACGTTTTCCAGTTAAACGTAACACTGATTATTCTCTCAATATTCAGACGTTTGCAACTTGGAATATCAAAGGTGTAACTATCTATTTTTTGGGTCGGAAGGCAAATGAAACTGACAAGACATTTACTAAAGTCGTGCATGTAAAAACATATTCTGGTTCACCATCGGTGACACAGGCGGTTAAATGGCATCTAATATTTAATTCTGGAGATTGCGATGAAGGGTTCATTCGCATTGATAATAATGGTGCTACTGACGGTAAAACATCTATGCTATTCTTCGCCGAGTTGGACTGTTACGAGGGAACGACTGATAGAGTATGGCAAGCGTCAACTAAAGATTTAGAAGAAGAGATGGAAACTAAAGCCGATGCTGCCATGACGATTGAACAGATTAATGCGCTTAATGAAAGGGCTGGAATCATTAAAGCAGAGATGGAAGCCAAAGCAAGCGCTGAAATTTTGAATAACTGGATTAAAAATTACCAAGATTTCGTCAAGGCAAACGAGACCGAGAGAGCTGCAGCCGAGAAAGCTTTGGTTAGTTCAAGTCAGCGGGTGTCAACCATTGCTAAAGACTTGGGTGAACTGTCTGATCGTTGGAATTTCATCGACACTTACATGAGCTCATCAAATGATGGGCTTGTGATTGGAAAGAATGACGGTAGCTCTAGCATGATGTTTAACCCTAACGGTCGCATTTCAATGTACTCGGCAGGGGAGGAGGTCATGTATATTTCGCAAGGTGTAATCCACATCGAAAACGGTATATTCTCGAAAACTATCCAAGTTGGTCGATATCGTGAGGAACAGTACCATCTTAACCCAGACATGAATGTCATTAGATATGTAGGAGGATTTTAA

Genome Context

Tertiary structure

PDB ID

7784d7d172fc0e930436b02f277f65855e2899dc4bfddf412eaf83328471bdef

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7396

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
A comparative genomics approach for identifying host-range determinants of bacteriophages infecting Streptococcus thermophilus	Szymczak,P., Rau,M.H., Monteiro,J.M., de Pinho,M.G., Filipe,S.R., Vogensen,F.K., Zeidan,A. and Janzen,T.	2019-05-29	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature