Protein

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UniProt accession
A0A8S5SQQ6 [UniProt]
Protein name
Collagen-like protein
RBP type
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MSENTINIYMGTEDKVDVKDATQIIKLQGPKGEPGPKGEDGVQGPKGEPLRFEELTEEQKLELKGEKGDKGEPGTPGPKGEPFKFSDFTPEQLELLKGPKGDTGENGAQGIQGPQGDNVNAEVVSKIKNLLLDNNVMVHSESFEGIMLDYFKLCVLSSGSASFIKDNSLFAPVVEINDNVLLISYTIGLPFQINDGPIEYINNQNKEIPITSSGPITVKFYNARMELMFTKTVQAQ
Physico‐chemical
properties
protein length:236 AA
molecular weight: 25751,78800 Da
isoelectric point:4,62370
aromaticity:0,06780
hydropathy:-0,49237

Domains

Domains [InterPro]
DC_1284
STR
11–115
DC_1284 DC_2313
G3DSA:1.20.5.320
STR
27–61
G3DSA:1.20.5.320
IPR050149
Unmapped
29–116
IPR050149
A0A8S5SQQ6
1 236
Architecture
STR
RBD
STR 11-115 | RBD 116-236
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Caudovirales sp. ctGAB12
[NCBI] 		2827632 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF52914.1 [NCBI]
Genbank nucleotide accession
BK032644 [NCBI]
CDS location
range 293 -> 1003
strand +
CDS
ATGAGCGAAAATACTATTAATATTTATATGGGTACAGAAGATAAAGTTGATGTTAAAGATGCAACTCAAATTATTAAATTGCAAGGTCCAAAGGGCGAACCAGGGCCTAAAGGTGAAGATGGTGTGCAAGGACCAAAAGGCGAGCCATTACGCTTTGAGGAATTAACCGAAGAACAGAAGCTGGAATTAAAGGGAGAAAAAGGCGATAAAGGCGAACCAGGGACTCCAGGTCCTAAAGGTGAACCTTTTAAATTTAGTGACTTTACTCCTGAGCAGCTGGAATTACTGAAAGGTCCTAAAGGTGATACTGGAGAAAACGGAGCACAAGGCATTCAGGGGCCACAAGGTGATAATGTAAATGCCGAGGTAGTCTCCAAAATTAAGAATTTATTGTTAGATAATAATGTAATGGTCCATAGTGAAAGTTTTGAAGGTATTATGCTGGATTATTTTAAACTATGCGTATTATCGAGCGGTAGTGCTAGTTTCATAAAAGACAATAGCTTATTTGCACCAGTTGTTGAAATTAATGATAATGTACTCCTAATTTCATATACGATAGGATTACCGTTCCAAATCAATGATGGTCCAATCGAATATATTAACAATCAAAATAAAGAAATTCCAATAACATCTAGCGGACCAATAACAGTCAAGTTCTACAATGCGAGAATGGAATTGATGTTTACGAAAACTGTTCAAGCTCAGTAG

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
c7fa3f63ff137b6234c2cb1d2d98c82c8e20aade95b905bb8399bc85df2bac15
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7482
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50