Protein

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Genbank accession
WPH64018.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MAKVIDELLIGVSVDADEKEFNEVQSGFDQIKSAALSLGAVLAGGLSIDAIIGKTNELAAEWDALAKETMGYEIDPILLQNLQYMSESLGGAKDDAMGLLLNLRATQQGLQIGNLGYLEELTKITGRDVIPLFQAGDEEDILKNLISLFSDMSTEQRQAAFDVMGFTTGTRNLMQSSIEGYEAMIERSNHLGNITRENTTRAENLQQAYTDAAKASDAAWQDFYGNLMEGSTKSLNYITERLVEARKAQEGTKGFFQTYQAAGGEVLESSISDLLGNLFDVIAPEDWRNNPMFSKEALEKSISNSETNQSSSVSNTKNESSSSVNNYNQITINTGGMSQRQVENVVYKVINGAATQTEQDLKVNSQ
Physico‐chemical
properties
protein length:366 AA
molecular weight: 39957,89550 Da
isoelectric point:4,38276
aromaticity:0,06557
hydropathy:-0,37268

Domains

Domains [InterPro]
DC_0789
STR
1–366
DC_0789
WPH64018.1
1 366
Architecture
STR
STR 1-366
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpP_1
[NCBI] 		3092672 No lineage information
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPH64018.1 [NCBI]
Genbank nucleotide accession
OR734989 [NCBI]
CDS location
range 11300 -> 12400
strand -
CDS
ATGGCAAAAGTAATTGATGAGCTGTTGATTGGCGTCTCTGTTGATGCTGATGAAAAGGAGTTTAATGAAGTTCAAAGTGGGTTTGATCAAATCAAATCCGCCGCCTTATCTCTTGGAGCAGTTCTTGCTGGTGGCCTTTCGATTGATGCAATTATAGGAAAAACAAACGAACTTGCAGCTGAGTGGGACGCATTAGCAAAAGAAACTATGGGTTACGAAATTGACCCGATTCTACTCCAGAACCTTCAGTACATGTCCGAATCCCTCGGTGGGGCTAAAGACGACGCGATGGGGTTATTGCTAAATCTTAGAGCAACACAGCAAGGGTTGCAGATTGGCAATCTGGGGTATCTTGAAGAATTAACAAAAATTACAGGTCGTGATGTTATACCCTTATTTCAGGCTGGAGATGAGGAAGATATTCTAAAAAATTTAATCTCTTTGTTTAGTGATATGAGCACTGAACAAAGACAGGCTGCATTTGATGTAATGGGCTTTACCACTGGAACAAGAAATCTAATGCAATCGAGCATTGAAGGCTATGAGGCCATGATTGAGCGCTCTAATCATCTAGGTAATATAACCAGAGAAAACACCACTAGAGCTGAAAATCTTCAGCAAGCATACACTGACGCTGCAAAAGCTTCAGATGCGGCATGGCAGGACTTCTATGGTAATCTGATGGAAGGTTCAACAAAATCTCTAAACTACATTACAGAGAGGCTTGTAGAGGCAAGAAAGGCACAGGAAGGGACTAAGGGTTTTTTCCAAACTTACCAAGCTGCTGGTGGAGAGGTTTTAGAAAGCTCAATTAGTGACTTGTTGGGGAATTTATTCGATGTTATAGCTCCAGAAGATTGGCGAAACAACCCAATGTTTAGCAAAGAAGCCCTTGAAAAATCGATATCAAATAGCGAGACAAATCAGTCAAGCTCAGTAAGCAATACAAAAAATGAATCATCAAGTTCAGTCAATAACTACAACCAAATAACAATAAACACTGGCGGCATGTCACAAAGACAAGTCGAAAACGTTGTTTACAAGGTAATTAATGGTGCTGCAACGCAGACTGAACAGGATTTAAAGGTTAACTCTCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f4324461ca6514dc5509a64c71fa68e540e8ba58457ac1bb832f031bad6e6a2a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7672
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, identification and host range expansion of a novel lytic Vibriophage vB_VpP_1 and its application of biocontrol against Vibrio parahaemolyticus in oyster Li,F., Zhang,D.F., Bai,W.T., Li,X.P. and Li,J.R. 2022-04-07 — GenBank