Protein

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Genbank accession
YP_009213538.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MPLGNPIRKQNESRIISVLATEGQSVFTVEGGYIINQISVFRNGVRLSNSEDFTAGDGSTVTLNDEANVDDRIEFHIFDRFTVQNAIIGAASTQTINGDLVLNGKLFGQLDVPSINLTGIITATELDLNGKGDISGDLKVTGISTFINVDATGIVTARQGLRINAGGLNVVGVTTTRGLSIFGNTTGLNVASGISTFTNVDATGIVTARQGLRINAGGLNVTAGISTFGGDIQAQGDVSIVDTIYHSGDTDTRIRFPSNDQIQFETNGANRLNIDSTGKIKQTAASGDTIFTLKRSNTNTTGSFGVLNFAASDDHSVANIQSLGDGDNEGAHIVFKTTTAAASDDVYNAATVERLRITSDGIIEVQDSVALGANAPQYRGKIRISGVSDATTAGGIEFHTSSGGGAGYGSRITADASGNMHFLTRSNNSAWSERARITSTGLFGIGTNAPDAKLYVNGVSSANVITARTADTNGNCIIDILSEGTTGNSRINFSDTAGTDGQVSYSHSARALIFATAGTTERLRIDSSGHMGLGVSPNTSWPSNGDFRALQIGTGACVFGRGSGDEDRGGIAVNFYHDGSARKYLANGHASIIDLNDGTFVFSTASSNSSGAGAAMSATQRLHIDNGGKLIMGSGTTTNDTSERFLVDGSASGDHCGLGIKTNNNVHDGYIAFHDSDATYRGKIVYDHEVDDMFIFCAGTERLRVDTIGQITSTSDNNGQVIHKFYNSADEGNASHTVEHHFNFNRTSGSMNLSGARIVAGKEREWIGSASNQDGFLAFYTCLNESPGEKMRIGSNNIFLHSTNSSGSNGRIYTNNAGANHATLEINQNSGSGTEMMAFRNGGTQIGSITQSGLSNTSYNTSSDYRLKENDVAISDGITRLKQLRPIRFNWKIDPSTTQDGFFAHEVSPVVPESVRGNKDEVFDTDGVGTQVVGGPKYQQIDHSKLVPLLTAALQEAITEIETLKTKVAALEGS
Physico‐chemical
properties
protein length:974 AA
molecular weight: 102575,35310 Da
isoelectric point:5,25382
aromaticity:0,06571
hydropathy:-0,27341

Domains

Domains [InterPro]
DC_1386
STR
364–572
DC_1386 DC_1367
IPR030392
CHP
863–915
IPR030392 Coil
IPR030392
CHP
863–968
IPR030392
YP_009213538.1
1 974
Architecture
STR
RBD
STR 364-572 | RBD 692-974
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009213538.1
1 974
Domain Start End Length (AA) Confidence
N-terminal 1 126 126 0,9839
Central domain 127 325 200 0,1484
C-terminal 326 974 648 0,9558
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-126
Central
127-325
C-terminal
326-974

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-TIM68
[NCBI] 		1542477 Uroviricota > Caudoviricetes > Pantevenvirales > Haifavirus > Haifavirus tim68
Host Prochlorococcus sp.
[NCBI] 		1220 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009213538.1 [NCBI]
Genbank nucleotide accession
NC_028955.1 [NCBI]
CDS location
range 29546 -> 32470
strand +
CDS
ATGCCATTAGGAAATCCAATAAGAAAACAAAATGAGTCTCGTATTATAAGTGTCCTTGCCACTGAAGGGCAGAGTGTTTTTACGGTTGAAGGTGGTTATATCATTAATCAAATTAGTGTATTTCGTAATGGTGTTAGACTCAGTAATTCAGAAGACTTCACAGCAGGTGATGGATCAACAGTCACACTGAATGATGAAGCAAATGTAGATGATAGAATAGAGTTTCATATATTTGATAGATTCACAGTACAGAATGCAATAATTGGTGCAGCATCCACTCAGACAATTAATGGTGATTTAGTATTAAATGGTAAGTTATTTGGACAGTTAGATGTACCTTCAATCAATCTTACAGGAATAATAACTGCAACAGAATTAGACCTAAATGGAAAGGGAGATATTAGTGGTGATTTAAAAGTAACTGGTATTTCTACATTTATCAATGTAGATGCTACTGGTATAGTAACTGCAAGACAAGGTTTAAGAATTAATGCTGGTGGTTTAAATGTTGTTGGTGTTACAACAACAAGAGGATTAAGTATATTTGGAAATACCACAGGATTAAATGTAGCTTCTGGTATTTCTACATTTACCAATGTAGATGCTACTGGTATAGTAACTGCAAGACAAGGTTTAAGAATTAATGCTGGTGGATTAAATGTGACTGCTGGTATATCTACATTTGGTGGTGATATTCAAGCACAAGGTGATGTAAGCATAGTAGATACGATTTATCATTCTGGTGATACTGATACCAGGATAAGATTTCCTTCAAATGATCAAATTCAATTTGAAACAAATGGTGCTAATAGATTAAATATTGATTCAACTGGTAAAATAAAACAGACTGCTGCTAGTGGTGATACAATTTTTACTCTTAAAAGATCAAACACAAATACTACAGGTTCATTTGGGGTATTGAATTTTGCTGCATCAGATGATCACTCTGTTGCAAACATACAATCTTTGGGTGATGGTGATAATGAAGGAGCACATATTGTATTTAAAACAACAACTGCAGCAGCAAGTGATGATGTTTATAATGCAGCAACTGTAGAAAGACTTCGCATCACATCAGATGGAATTATTGAAGTACAAGATTCTGTTGCTTTAGGTGCAAATGCACCACAGTATAGAGGAAAAATAAGAATCAGTGGTGTAAGTGATGCAACAACTGCTGGTGGAATTGAATTTCATACCTCAAGTGGAGGTGGTGCTGGATATGGAAGCAGAATTACAGCTGATGCATCAGGTAATATGCATTTCCTTACTAGGAGTAATAATTCTGCTTGGAGTGAAAGAGCTCGCATCACATCAACAGGCTTATTTGGTATAGGCACTAATGCTCCAGATGCTAAGTTATATGTAAATGGTGTATCGTCAGCGAATGTAATAACTGCAAGAACAGCAGATACTAATGGTAACTGTATAATTGATATACTATCAGAGGGTACAACTGGAAATAGTAGAATAAATTTCTCTGATACTGCGGGAACTGATGGACAAGTAAGTTATAGTCATAGTGCTAGAGCACTAATATTCGCTACTGCTGGAACTACAGAAAGACTTCGCATTGACTCAAGTGGTCATATGGGATTGGGTGTCTCTCCTAATACCAGTTGGCCATCAAATGGAGACTTCAGGGCATTACAAATAGGAACAGGTGCATGTGTTTTTGGAAGAGGTAGTGGTGATGAGGATAGAGGTGGAATAGCAGTAAACTTTTATCATGATGGTTCTGCTAGAAAATATCTTGCAAATGGACATGCTTCTATAATTGATTTGAATGATGGGACATTTGTTTTTAGTACTGCATCATCAAACTCATCTGGTGCTGGTGCAGCAATGAGTGCTACTCAAAGACTTCACATTGATAATGGTGGTAAATTGATCATGGGTAGTGGTACAACTACTAATGACACAAGTGAAAGATTTCTTGTTGATGGTTCAGCTAGTGGTGATCATTGTGGACTGGGAATTAAAACTAACAACAATGTACATGATGGTTATATTGCTTTCCATGATAGTGATGCAACTTATAGAGGAAAAATAGTATATGATCATGAAGTAGATGATATGTTCATCTTTTGTGCAGGTACTGAAAGACTTCGTGTTGATACAATTGGACAGATAACATCAACTTCTGATAATAATGGTCAGGTAATTCACAAGTTTTATAATTCAGCTGATGAAGGAAATGCTTCTCATACAGTTGAACATCATTTTAATTTTAATAGAACTAGTGGTTCTATGAATTTATCAGGAGCAAGAATTGTTGCTGGTAAAGAAAGAGAGTGGATTGGTTCTGCATCTAACCAAGATGGATTTTTAGCATTCTATACTTGTTTGAATGAGTCACCAGGCGAAAAAATGAGAATTGGTTCTAATAATATATTCTTACATAGTACAAATTCAAGTGGTAGTAATGGAAGAATTTATACAAACAATGCAGGTGCTAATCATGCCACTCTTGAAATAAATCAAAATTCTGGTAGTGGCACTGAGATGATGGCATTTAGGAATGGTGGCACACAAATTGGTTCAATAACACAATCTGGTTTATCTAATACTTCTTACAATACAAGTTCTGATTATAGATTAAAAGAAAATGATGTTGCCATATCAGATGGTATTACAAGATTAAAACAACTTAGACCTATAAGATTTAATTGGAAAATAGATCCATCTACAACTCAAGATGGTTTCTTTGCTCATGAAGTTTCTCCTGTAGTTCCAGAATCCGTTAGAGGTAACAAAGATGAAGTATTTGATACTGATGGAGTTGGTACGCAAGTAGTAGGTGGACCAAAATATCAACAAATAGATCACAGCAAACTTGTACCTTTGCTTACTGCTGCATTACAAGAAGCAATCACTGAGATTGAAACTCTTAAAACAAAGGTCGCTGCCCTTGAGGGTTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1df3990392eef72a2d6e837acc72c196287fb91667c014960752a875801b9598
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5903
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50