Protein

View in Explore
Genbank accession
AUM57602.1 [GenBank]
Protein name
putative structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYGIWTTPVGPGPASPAELFIDSNTTFPQLKNRVSGNFAFNGKTCDLPINGWDGSGQIVIVPTGSVVWERYIPPNVTSDVYWIDNISVINNSTFRVTMDYNVNGWIFDMAFNVYQIWPRANRNYGITFSNTADYFSISDSGTVGQCIWAWEGTINSSMQIPAISGFDMSRATVFANWSNGSAGLLYNPSNRTVYVYQNRSHNNGNTNQTGSISGVRIAVFCDGSSVPTHNGGLNIYSPNGSQCVFSTYRTPFMVDRFMPMSGGNTSLTYPMIPLSYGAGAIRGSASGWYFQHTRSHTMNGSSFGTGYGRMIYSWSNQYDLGGGGSLGLSIPVLDAKKIFRSIQ
Physico‐chemical
properties
protein length:344 AA
molecular weight: 37627,57120 Da
isoelectric point:8,28710
aromaticity:0,13663
hydropathy:-0,18692

Domains

Domains [InterPro]
DC_1434
ATT
1–40
DC_1434 IPR045604
AUM57602.1
1 344
Architecture
ATT
STR
ATT 1-40 | STR 41-316 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUM57602.1
1 344
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0061
Central domain 11 209 200 0,0128
C-terminal 210 344 134 0,9971
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-344

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage LAMP
[NCBI] 		2065191 Uroviricota > Caudoviricetes > Mktvariviridae > Kuravirus > Kuravirus LAMP
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUM57602.1 [NCBI]
Genbank nucleotide accession
MG673519 [NCBI]
CDS location
range 20587 -> 21621
strand +
CDS
ATGGCATATGGAATATGGACAACACCAGTCGGACCGGGACCAGCTTCTCCGGCTGAACTTTTTATCGACAGCAACACAACTTTCCCACAACTTAAGAATAGAGTCAGTGGCAATTTTGCATTTAACGGCAAAACTTGTGATCTCCCAATAAATGGGTGGGACGGAAGTGGTCAAATAGTTATTGTACCAACAGGGTCTGTTGTGTGGGAGAGATATATACCACCTAACGTAACTTCGGATGTATATTGGATAGATAATATCTCAGTTATCAATAACTCCACTTTCAGAGTTACTATGGACTATAATGTTAATGGGTGGATATTTGACATGGCTTTTAATGTGTATCAAATATGGCCTAGAGCTAATAGAAACTACGGGATTACTTTTTCTAACACAGCTGATTACTTCTCTATCTCTGACTCAGGTACTGTCGGTCAGTGCATTTGGGCTTGGGAGGGTACTATAAATAGCTCTATGCAGATACCTGCTATTAGTGGATTTGATATGAGTAGGGCCACTGTATTTGCGAACTGGAGTAATGGGAGTGCTGGATTGCTTTATAACCCCTCCAACAGAACTGTGTATGTGTATCAGAATAGGTCTCACAATAATGGAAACACAAACCAGACAGGCTCTATTAGTGGTGTTAGGATTGCGGTATTTTGTGATGGGTCTAGTGTCCCTACTCATAATGGGGGTTTAAATATTTACTCTCCTAATGGGTCTCAGTGTGTATTCTCTACTTACAGAACCCCGTTTATGGTAGATCGTTTTATGCCTATGAGTGGTGGGAATACATCTCTGACGTATCCAATGATACCTCTTTCTTATGGAGCTGGTGCTATACGGGGGAGCGCTAGTGGTTGGTATTTTCAGCACACAAGATCTCACACAATGAACGGGTCTTCTTTTGGAACAGGATATGGAAGAATGATATATTCGTGGTCTAATCAGTACGATCTCGGTGGTGGGGGTTCTCTAGGGTTAAGTATTCCGGTATTAGACGCCAAGAAGATTTTTAGAAGCATACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
73ad0479b00149ce7fdf895b9a46e33ff3819606e5df4757f29a916645078a0d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7306
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel LAMP bacteriophage infecting Escherichia coli Golomidova,A.K., Letarov,A.V., Kostryukova,E.S., Babenko,V.V. and Prokhorov,N.S. 2018-01-18 — GenBank