Protein

View in Explore
Genbank accession
UPW37870.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MATPTNYQLTRTVNAIPKVFVGATFEEIKKNIIDWLSSQEEFKDYDFVGSRMNILIDMLAYNTLYMQQFANTALYESFIGTANLRSSVVQAAQDNGYLPSSKSAAKTTVMLTCTQALNEKNIRIPRGTKFLAYARDTSADPYSFVTTDNVIAVRDVNNQYWPIVSLAQGRIIRTELKYDPKTPILIRDPDIDRQEVKLYVDGAEWINWTNKSMVHAGSTSTIYYMRETVDGNTEFFFGEGEAEKSVAGGVLEANYIGGLKPVKDSTIVIEYLRTDGEVANGAVDFSYADSLAYITVEKITENYNDDPDYVGADGGGDPEDIERIRELAVVKREAQMRAVTGTDYDTFVSERFGSIVQAVQTFTDSNKPGYAFVTIKPKSGLYLTAVQREDIQDYLKEFNLAPITPSVISPDYLFLKHKIKVSYALNKLQESEQWLSAQILSQIDRYYINEVEIFNHGFAKSKMLTYIDNADHSILGSSATVTMVREVLNFFKTPESGIKYYNQYTNRSVVSSEFEFVPTNVSEDLPSYNVRIAATDKDERGDGKIIIGPFRPGDVIENQYIKPYTGNDFDKMPAPADQSVYYVIGEIDYYSDFIFWDIAAIGLTSDRFEVQSIELYAGPDQDNIFTKDGSLIVFEDDLRPQYTTIELEPITI
Physico‐chemical
properties
protein length:652 AA
molecular weight: 73577,59440 Da
isoelectric point:4,59898
aromaticity:0,11810
hydropathy:-0,30353

Domains

Domains [InterPro]
IPR034698
Unmapped
10–652
IPR034698
IPR049026
TAS
24–97
IPR049026 IPR049029 G3DSA:3.30.300.200 IPR054065 IPR049028
IPR049029
TAS
104–160
IPR049029 IPR049027 IPR054065 IPR049028
UPW37870.1
1 652
Architecture
TAS
TAS
ATT
TAS
ATT
TAS 24-97 | TAS 104-169 | ATT 340-408 | TAS 411-484 | ATT 485-609 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_ESCO10
[NCBI] 		2918865 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW37870.1 [NCBI]
Genbank nucleotide accession
OM386655.1 [NCBI]
CDS location
range 64157 -> 66115
strand +
CDS
ATGGCTACTCCTACGAATTACCAATTAACAAGAACCGTTAACGCTATCCCAAAAGTATTTGTGGGAGCTACGTTTGAAGAAATTAAAAAGAACATCATTGACTGGCTTTCTAGCCAGGAAGAATTTAAGGATTATGATTTCGTTGGTTCTCGAATGAATATTCTTATCGATATGCTTGCTTATAATACGTTGTATATGCAGCAGTTTGCTAACACAGCTTTATACGAATCTTTTATAGGAACGGCAAACCTTCGTTCTTCGGTTGTCCAGGCTGCACAAGATAACGGATATCTCCCTAGTTCTAAATCAGCGGCAAAAACTACGGTAATGCTTACTTGTACCCAGGCCCTTAATGAAAAGAATATCCGTATCCCTAGAGGTACTAAATTCCTGGCTTATGCCCGTGATACATCAGCGGACCCGTATTCTTTTGTGACCACTGATAACGTTATTGCCGTACGCGATGTTAATAACCAATATTGGCCTATTGTTTCTTTGGCCCAGGGACGTATTATTCGTACTGAACTTAAATATGACCCTAAAACTCCTATTCTTATTCGTGACCCGGATATTGATAGACAAGAAGTTAAACTTTATGTTGATGGGGCCGAATGGATTAACTGGACTAATAAATCAATGGTCCATGCAGGCAGTACTTCAACAATTTATTATATGCGTGAAACCGTAGATGGTAATACAGAATTCTTCTTTGGTGAAGGTGAAGCCGAGAAATCCGTTGCCGGTGGAGTATTAGAAGCTAATTATATCGGTGGTCTGAAACCTGTTAAAGATTCTACTATTGTTATCGAATATCTTCGTACAGACGGTGAAGTTGCTAACGGTGCAGTGGATTTCAGTTATGCAGACTCATTGGCTTATATAACCGTAGAAAAAATTACAGAAAACTATAATGACGACCCGGATTATGTGGGTGCTGACGGTGGCGGCGACCCTGAAGATATTGAACGCATTCGAGAGCTGGCTGTAGTTAAGCGTGAAGCCCAGATGCGTGCTGTTACAGGAACCGACTATGATACATTCGTGTCTGAACGTTTTGGTTCTATTGTACAGGCAGTACAAACCTTTACAGACTCAAATAAACCAGGTTATGCTTTTGTTACCATTAAACCTAAATCAGGGCTGTATTTGACCGCTGTTCAACGTGAAGATATCCAAGATTATCTAAAAGAATTTAACTTAGCACCTATTACCCCTTCTGTTATTTCTCCCGACTATTTGTTCTTAAAGCATAAAATTAAAGTTTCTTATGCTCTGAATAAATTACAGGAATCTGAACAGTGGTTATCGGCTCAAATTCTTTCTCAGATAGATCGTTATTATATTAACGAAGTAGAAATTTTTAACCACGGTTTCGCTAAGTCTAAAATGTTGACTTATATTGATAATGCAGACCACAGTATTTTAGGTTCTTCGGCTACAGTAACAATGGTTCGTGAGGTATTGAACTTTTTCAAAACTCCTGAGTCAGGTATTAAATACTATAATCAATACACTAACCGTTCTGTGGTTTCTAGTGAATTTGAGTTTGTCCCTACTAACGTTTCTGAAGACCTCCCATCATATAATGTCAGAATTGCTGCTACAGATAAAGATGAGCGTGGTGATGGTAAAATAATTATTGGTCCTTTCCGTCCAGGAGATGTGATTGAAAACCAATATATTAAACCTTATACAGGAAATGACTTTGATAAAATGCCGGCTCCTGCGGACCAATCTGTTTATTACGTTATAGGTGAAATCGATTATTATTCGGATTTCATTTTCTGGGACATTGCGGCTATCGGTTTAACGTCTGATCGTTTTGAAGTTCAATCTATAGAACTTTATGCAGGACCTGACCAAGATAACATCTTTACAAAAGACGGTTCGTTAATTGTATTTGAAGATGACCTCCGCCCTCAATACACGACCATTGAATTAGAACCTATTACAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1e396b408a2257a47b17f808ca0f1c13d07a48a966bef13f08d4860f5fc6979b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8144
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Avian Pathogenic Escherichia coli bacteriophages Nicolas,M., Trotereau,A. and Schouler,C. 2015-06 — GenBank