Protein

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Genbank accession
BFM93980.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MLEFLLGGKPPGVSIAPADPYFSYVKLLMQFNGNGTDVKGHAMTAGGSPSFVTDTHGTAVDFRSSLSNYNTPNASEFNLGTNDWTIEAIVNRISDIPTSNDCGIYYQGETAGNQQIFSFELLGNIASGAKPRVLIRGDSGTLLDLTSASVSMTQNVWSHIAAVRQGATIWIYLDGVRIAQGSIGSGVAVPWYSGYKPTVGARTGGGGFSFPGLIDAFRLTNGIARYTNASFTPPTSFPNSGSYRYVRLNSIAPIGGGYGTLSEVQVLDSGSGTNWCTKSGTVATASSYYTLTGLPQAPGNAIDGIIDGLPEHRWSSGSQTPPHWWMVDLGQARSFDSIKIAALTGASQQPSSLVIQGSNDGTNFDTLKTVTGLALADSTLKEILQ
Physico‐chemical
properties
protein length:385 AA
molecular weight: 40536,71070 Da
isoelectric point:5,50806
aromaticity:0,09610
hydropathy:-0,09143

Domains

Domains [InterPro]
DC_2085
STR
3–211
DC_2085 IPR000421
G3DSA:2.60.120.200
STR
24–224
G3DSA:2.60.120.200 G3DSA:2.60.120.260
IPR013320
STR
27–222
IPR013320 IPR008979
PF13385
LEC
74–221
PF13385 IPR000421
BFM93980.1
1 385
Architecture
STR
RBD
STR
STR 3-224 | RBD 261-271 | STR 272-385
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
BFM93980.1
1 385
Domain Start End Length (AA) Confidence
N-terminal 1 21 21 0,9627
Central domain 22 220 200 0,4728
C-terminal 221 385 164 0,6825
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-21
Central
22-220
C-terminal
221-385

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage FLC4-3B
[NCBI] 		3157663 Viruses > unclassified bacterial viruses >
Host Ralstonia pseudosolanacearum
[NCBI] 		1310165 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BFM93980.1 [NCBI]
Genbank nucleotide accession
LC819007 [NCBI]
CDS location
range 146159 -> 147316
strand -
CDS
ATGTTGGAATTTTTGTTGGGCGGGAAGCCTCCTGGCGTATCGATTGCGCCAGCCGATCCCTATTTCTCGTACGTCAAGTTGTTGATGCAGTTTAATGGCAACGGCACCGATGTAAAAGGTCACGCGATGACTGCGGGAGGTTCTCCTTCCTTTGTTACAGACACGCACGGCACGGCAGTTGACTTCCGGAGTTCGCTCTCGAACTACAACACGCCCAATGCCAGCGAGTTTAACCTCGGCACCAATGACTGGACGATTGAAGCCATCGTTAATCGGATTTCGGACATCCCCACGAGTAACGATTGTGGCATCTACTACCAGGGCGAGACTGCGGGCAACCAGCAAATCTTTTCATTCGAGTTGCTCGGTAACATTGCCTCTGGAGCCAAGCCACGAGTTTTGATCCGTGGGGACTCTGGGACGTTGCTGGATCTGACCTCTGCATCCGTTTCCATGACGCAAAACGTCTGGTCACACATCGCGGCGGTTAGACAGGGTGCGACGATCTGGATATATCTGGACGGTGTTCGTATCGCTCAGGGCAGTATTGGTTCCGGTGTGGCTGTGCCGTGGTACAGCGGTTATAAGCCAACGGTAGGCGCGCGTACTGGTGGCGGAGGTTTCTCCTTTCCGGGTCTGATAGATGCTTTCCGTCTTACCAACGGGATTGCGCGTTACACCAATGCATCGTTCACGCCGCCGACCTCGTTCCCGAACTCGGGCTCGTATCGCTATGTTCGATTGAACAGCATTGCGCCGATCGGTGGTGGATACGGTACACTGAGTGAGGTGCAGGTTCTCGACTCGGGTAGCGGTACGAACTGGTGTACCAAGAGCGGCACTGTCGCCACGGCCAGCAGCTACTATACCCTGACCGGGCTTCCACAAGCGCCAGGCAATGCAATCGACGGCATCATCGACGGGCTTCCTGAACATCGCTGGTCATCCGGAAGTCAGACACCACCGCACTGGTGGATGGTGGATCTGGGACAAGCGCGGTCGTTTGACTCGATCAAGATTGCGGCACTCACTGGTGCGAGCCAACAGCCTTCCAGCCTTGTGATTCAGGGTAGCAATGACGGCACCAACTTCGATACGCTGAAGACGGTAACTGGGTTGGCGTTGGCCGATAGCACGTTGAAGGAAATCCTGCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fc967c6359748ed18c973faf6728dc380b3f432d6c705110e1874e9ebc83776d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8840
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequences of novel Ralstonia jumbophages isolated from leaf litter compost Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2024-08-09 — GenBank