Protein

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Genbank accession
YP_009792790.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MQGTVNGVTSKDVSGNVNVTLSAVEAGAGILVFTGALTGNISVIVPAVAKSWIVSNRTSGAFSLTVKTAAGTGIAVAQGRNVELWCDATNVLQSTNDYTNAALLGTPTAPTPTAGDSSQQVANTEFVQQTANDLAIEYAIIFGG
Physico‐chemical
properties
protein length:144 AA
molecular weight: 14533,04490 Da
isoelectric point:4,35650
aromaticity:0,05556
hydropathy:0,27639

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage vB_BbrM_PHB04
[NCBI] 		2029657 Uroviricota > Caudoviricetes > Phabquatrovirus >
Host Bordetella bronchiseptica
[NCBI] 		518 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009792790.1 [NCBI]
Genbank nucleotide accession
NC_047861.1 [NCBI]
CDS location
range 93494 -> 93928
strand -
CDS
GTGCAGGGCACGGTCAACGGCGTGACCTCCAAGGATGTCAGCGGCAACGTCAACGTCACGCTATCCGCCGTCGAGGCCGGCGCGGGGATCCTGGTGTTCACCGGCGCTCTGACCGGCAACATCTCCGTCATCGTTCCGGCCGTGGCGAAAAGCTGGATCGTCTCGAACCGCACCTCCGGCGCGTTCTCGCTGACCGTCAAGACGGCCGCCGGCACCGGCATCGCTGTCGCGCAGGGCAGGAACGTCGAGCTCTGGTGCGACGCCACGAACGTCCTGCAGTCGACCAACGACTACACGAACGCGGCCCTGTTGGGCACGCCGACCGCGCCGACGCCGACCGCCGGCGACAGCTCGCAGCAGGTCGCCAACACCGAATTCGTCCAGCAGACGGCGAACGATCTCGCCATCGAATACGCAATCATCTTCGGGGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
40bbda1add1e8aa8d488df48c18b1f472b1c2785c9261940272df708762bccbb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8489
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a novel bacteriophage infecting Bordetella bronchiseptica Chen,Y., Song,J. and Wu,B. 2018-09-18 — GenBank