Protein

View in Explore
Genbank accession
QXV76504.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MIKKVITGSKGGGGKPHTPVEMEDNLISINKIRVLLAVSDGEVDPDFDMKMLLLNDVPVMNDDGTYNYEGITAEFRPGTQTQDYIQGFTDSASEVTMNRVIDRDTPYSINVTNKSLSAIRIKMYMPRGVKVESNGDKNGVRVEYKVELAVDGAAFTEYFTDVIDGKTMSGYDRSRRINLPAFNSQVIVRVSRVTPDSDDSNLIDEMQLKSYAEVIDAKFRYPLTGLLFVEFDSKMFPTQIPNISLRKKWKVINVPSNYNPITRDYNGSWDGTFKKAWSNNPAWVLYDIITNQRYGLDQRELGINVDKWALYEAGQYCDQMVPDGKGGTEPRYLCDVVIQSQIEAFKLVRDICSIFRGMSFWNGESLSVVIDKPRDPSYIFTNENVVGGNFSYSFASEKSMYTTCNVQFDDHENLYQQDVEPVFDTDAARRFGNNPTSITAIGCTRRSEANRRGRWILRTNLRSTTVNFATGLEGMIPQIGDVVAIADNFWSSNLTLNLSGRVMEVSGLQIFTAFRVDARAGDFIVVNKPDGKPVKRTISSVSPDGKTIEINVGFGFDVAPSTIFAIDRTDVALQQYVVTDIKKGDGDEEFVFSITAVEYDPNKYDAIDYGVNVDDRPTSIVDPDKLPAPQNVAVESFSRIVQGLSVETMVISWEKVDYAAFYEVQWRKNNGNWINVPRTQTNETFVEGIYAGEYSVRVRAISSSENASVWSEVVTVGLTGKVGEPGAPINFTASDDVVFGIRLKWGMPEDSGDTAYIEVQQSPNNSVENASLLTLVPYPQHEYFHTPLEAGKMIFYRIRAIDKIGNVSPWTDLIPGMASTDVESIIGEIKVDIENSEGYQWLKENATDAIARIQNTAESAIENALANDKDIRIQRVKNGKFTAQIKESLQLIANETEARVTQVSQMEADFDGKINAQNTELRQVIATETEALSEEIEELKASIGDDIQAQLTQVQQAIANETEARTTADTALSARIGNNEAALNQKLDSWANVDSVGAMYGVKLGLTYNGQQYSAGMAMSLIASGNDVKSQLLFEADRFAIYNGANNHIRYPFIVEGGQVILSSAVIKDGFITNAMIGGYIQSNNYVWNQSGWHLGKDGTFLNFGSTPGEGSMKQDNQTISVRDQNGVLRVQIGRITGVW
Physico‐chemical
properties
protein length:1140 AA
molecular weight: 126615,38760 Da
isoelectric point:4,75370
aromaticity:0,09211
hydropathy:-0,32667

Domains

Domains [InterPro]
DC_0014
STR
1–1140
DC_0014
IPR053171
Unmapped
3–867
IPR053171 IPR015406
IPR055385
ATT
92–217
IPR055385 IPR032876 IPR013783 IPR013783 Coil
IPR003961
STR
627–716
IPR003961 IPR003961
IPR003961
STR
628–722
IPR003961 IPR003961
IPR003961
STR
638–708
IPR003961
IPR036116
STR
643–813
IPR036116
QXV76504.1
1 1140
Architecture
STR
ATT
STR
ATT
STR
STR 1-91 | ATT 92-217 | STR 218-342 | ATT 343-495 | STR 496-1140
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV76504.1
1 1140
Domain Start End Length (AA) Confidence
N-terminal 1 505 505 0,8971
Central domain 506 1077 573 0,0458
C-terminal 1078 1140 62 0,8559
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-505
Central
506-1077
C-terminal
1078-1140

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage BrunoManser
[NCBI] 		2851976 Uroviricota > Caudoviricetes > Drexlerviridae > Sertoctavirus > Sertoctavirus brunomanser
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV76504.1 [NCBI]
Genbank nucleotide accession
MZ501053.1 [NCBI]
CDS location
range 16575 -> 19997
strand +
CDS
ATGATTAAAAAAGTGATAACCGGATCGAAAGGTGGTGGCGGAAAGCCTCATACACCTGTCGAAATGGAAGATAACTTGATTTCAATCAACAAAATACGCGTGTTGCTGGCAGTGTCAGACGGCGAAGTCGATCCAGACTTTGACATGAAAATGTTGTTGCTTAACGACGTTCCAGTTATGAACGACGACGGCACATACAACTACGAAGGCATTACGGCGGAATTCCGTCCCGGTACGCAAACGCAAGATTACATACAGGGATTCACCGACAGCGCAAGCGAAGTAACGATGAATCGCGTTATCGATCGCGATACCCCGTACAGCATCAACGTTACGAACAAATCGCTTTCGGCTATCCGTATCAAAATGTATATGCCGCGTGGCGTGAAGGTGGAAAGCAACGGCGACAAGAACGGCGTTCGCGTCGAATACAAAGTCGAATTAGCTGTCGATGGTGCGGCGTTTACCGAATACTTCACCGACGTAATCGACGGTAAAACAATGTCGGGCTATGACCGCAGCCGCCGAATCAACCTTCCGGCGTTCAACAGTCAAGTAATCGTGAGAGTGTCGCGCGTTACTCCTGATTCCGACGATTCTAACTTGATCGACGAAATGCAGTTGAAAAGCTATGCGGAAGTAATCGACGCTAAATTCCGTTACCCGCTGACTGGTCTGTTATTCGTGGAATTCGATTCGAAGATGTTCCCGACCCAGATCCCGAATATTTCGCTTCGTAAAAAGTGGAAGGTGATTAACGTCCCGTCGAACTATAACCCGATTACCCGCGACTATAACGGAAGCTGGGACGGCACGTTCAAAAAGGCGTGGAGTAATAACCCGGCATGGGTTCTTTACGATATCATCACGAACCAACGTTACGGGTTAGATCAGCGTGAGTTAGGGATTAATGTCGATAAGTGGGCGTTATACGAAGCCGGGCAATATTGCGATCAGATGGTTCCAGACGGAAAAGGCGGAACCGAACCGCGTTACCTTTGTGATGTGGTTATTCAGTCGCAGATTGAAGCGTTTAAACTGGTTCGCGATATCTGTTCAATCTTCCGTGGTATGTCGTTTTGGAATGGCGAAAGTTTATCTGTCGTGATCGATAAGCCGCGCGACCCGTCTTACATTTTCACCAACGAAAACGTAGTCGGCGGTAACTTCTCTTACTCGTTCGCGAGCGAAAAGAGCATGTACACGACTTGCAACGTGCAGTTTGATGATCATGAAAACTTATATCAACAGGACGTTGAACCTGTATTCGATACTGACGCGGCGCGACGCTTCGGCAATAACCCGACAAGCATTACAGCGATCGGATGTACGCGACGCAGCGAGGCTAACAGGCGCGGACGCTGGATTCTGCGAACGAACCTTCGCAGCACGACGGTTAACTTTGCTACCGGGCTGGAAGGTATGATCCCGCAAATCGGCGACGTCGTGGCGATTGCAGATAATTTCTGGTCAAGCAATCTTACGTTAAACCTTTCCGGGCGAGTCATGGAAGTATCAGGATTGCAGATTTTTACGGCGTTTCGTGTTGACGCTCGCGCAGGTGATTTTATTGTCGTAAATAAGCCGGATGGGAAGCCCGTCAAGCGCACAATTTCTTCGGTGTCACCAGACGGCAAGACAATAGAAATAAACGTAGGATTCGGCTTTGACGTCGCACCAAGCACTATCTTTGCTATCGACCGAACCGACGTTGCTTTGCAACAGTACGTTGTAACCGATATCAAGAAAGGCGACGGCGACGAAGAGTTCGTATTCAGTATCACGGCGGTTGAGTATGACCCGAACAAATACGACGCAATCGACTACGGCGTAAACGTTGACGACAGGCCGACAAGTATCGTAGATCCTGACAAGTTGCCAGCGCCGCAAAACGTAGCTGTCGAATCGTTTTCGCGTATCGTGCAGGGCTTGAGCGTCGAAACGATGGTCATTAGCTGGGAGAAGGTCGATTATGCGGCATTCTATGAGGTTCAATGGAGAAAGAATAACGGTAACTGGATTAACGTTCCGCGCACCCAAACGAACGAAACATTCGTCGAAGGGATTTACGCGGGCGAATACTCCGTCCGAGTTCGCGCTATTTCATCTTCGGAAAACGCTTCCGTATGGTCTGAGGTGGTAACGGTCGGATTAACTGGCAAGGTAGGCGAACCGGGCGCACCGATTAACTTCACTGCGTCCGACGACGTTGTTTTCGGTATCCGGTTAAAATGGGGTATGCCTGAAGACTCCGGCGACACGGCTTACATTGAAGTGCAGCAATCGCCAAACAACAGCGTAGAAAATGCATCGTTGCTAACGTTAGTCCCGTATCCGCAACATGAGTATTTCCATACTCCGCTTGAGGCCGGGAAGATGATTTTCTATAGAATTCGCGCCATCGACAAAATCGGCAACGTGTCTCCTTGGACTGACTTAATACCCGGAATGGCGTCTACCGACGTGGAAAGTATCATCGGTGAAATTAAGGTTGATATCGAAAATTCAGAGGGATATCAATGGCTGAAGGAAAACGCAACGGACGCAATAGCGAGAATCCAGAACACGGCAGAATCGGCGATAGAGAATGCGTTAGCCAATGATAAGGACATAAGAATCCAGCGAGTGAAGAACGGCAAATTCACGGCGCAGATTAAAGAGTCGTTACAGCTTATCGCCAACGAAACCGAAGCGCGTGTGACGCAAGTTTCACAGATGGAAGCGGACTTCGACGGCAAGATTAACGCTCAAAATACTGAGCTTCGACAGGTTATCGCAACGGAAACGGAAGCGCTATCCGAAGAGATCGAAGAACTGAAAGCCTCAATCGGTGACGATATTCAGGCGCAGTTAACGCAGGTTCAACAGGCGATCGCCAACGAAACGGAAGCGAGAACCACGGCGGACACGGCGTTAAGCGCAAGAATCGGAAACAACGAAGCGGCATTGAATCAGAAGCTTGATTCGTGGGCTAACGTTGATTCTGTTGGTGCGATGTATGGCGTTAAGCTTGGATTGACATATAACGGACAGCAGTATAGCGCGGGTATGGCTATGTCTCTGATTGCTTCCGGTAACGATGTTAAGTCACAACTTCTGTTTGAGGCCGACAGATTCGCGATCTACAATGGTGCTAATAATCATATTAGATACCCATTTATCGTTGAGGGCGGGCAGGTAATACTAAGTAGCGCGGTGATTAAGGATGGATTCATCACTAATGCCATGATTGGTGGATACATTCAATCAAATAACTACGTGTGGAACCAATCTGGTTGGCACTTAGGGAAGGACGGAACGTTCCTTAACTTCGGTTCAACTCCGGGCGAAGGTTCGATGAAACAGGATAACCAGACGATCAGCGTTAGAGATCAGAACGGTGTTCTTCGCGTCCAGATTGGTAGAATTACTGGCGTATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fedb1c6bce61f7ea0fb8a684b2b95b0f9483f45ee6d60f124584de58391750b8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2992
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank