Protein

View in Explore
Genbank accession
QYC52950.1 [GenBank]
Protein name
L-shaped tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,77
Protein sequence
MADQNLKQIQFKRTSTENKAPGADIVARGEIALNTHGRTLAIYTKDEADNVVQLAGKGVPFLDTSGTLNVDGTTTLKDNVTISPNKAISFXXXXXXXXXXXXXXGKCANNDGWYIGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMGVGSNDVYIKNQRGSGVLQLTNDSNLTFRNSQVYYAMNGRGPGKSGTLLTNVENNRQAWQYVISAATAATPRWVKVATIKHPGXXXXXXDLMITGGIDSGHDKHYVDFITLSGRNLTSWSTSNLDNWVEWRRIGSPSKANVPEYYVVKNDAATDSEASFDFYAKIPRYGNGLYVTVLNTAGYNGQDSGKVIIYETNQDTGATAPSGSILVSMKQIFDSFAKPDFGDTTGTLPVNRGGTGATNVGDARNNLGLGTAAVRNVGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKADVGLGNLTNDTQVKKAGDTMTGDLAAPXXXXXXXXXXXXYVNAGTGNAHVWFRTNANERGVIWATPNTADLGQINIRAKTTGGTSAGDFSFRSDGRLDVPVAVKVGGAAMLTKDGNITSGSMFGGNLNNYLTSIKNDIAAGDNKQVSKTGDTMTGNLTINANLKVENPNGTMVDLGSENSDKYSRLTLARKVGSGATVAMLKVTPEGHVQFGYQDAVATPAPTKYIRVKSNGLEVEGDLVFNQTYRGTEEAVDITDKTNDLNXXXXXXXXXXXXXXXXXXXXXXXXNIANKPTSDGNFVLEVLSLRKISDTDWTCKQTFTTKNGGVEGTYVRYAQNGSWSAWKEVVAGVQPINLGGTGATSVASARNNLGVGEGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDADGNQTVYGNAXXXXXXXXXXXXXXXXVINANGGIIVPTTKYVQIADAPTQNNQATNKKYVDDKVASAISNAGDTYLPLAGGTITGRLTITGDQLKTTSLWTTGDAAVNGALTVDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNK
Physico‐chemical
properties
protein length:1539 AA
molecular weight: 85470,72750 Da
isoelectric point:6,38128
aromaticity:0,06922
hydropathy:-0,39617

Domains

Domains [InterPro]
DC_1942
ATT
4–126
DC_1942 DC_1942 Coil Coil Coil cd19958 DC_0238 Coil
Coil
Unmapped
187–187
Coil DC_0468 Coil
QYC52950.1
1 1539
Architecture
ATT
ATT
STR
RBD
ATT 4-126 | ATT 173-467 | STR 560-944 | RBD 1089-1227 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYC52950.1
1 1539
Domain Start End Length (AA) Confidence
N-terminal 1 1046 1046 0,3267
Central domain 1047 1528 483 0,5335
C-terminal 1529 1539 10 0,3636
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1046
Central
1047-1528
C-terminal
1529-1539

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM_TU02
[NCBI] 		2863278 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYC52950.1 [NCBI]
Genbank nucleotide accession
MZ560702.1 [NCBI]
CDS location
range 142789 -> 147408
strand +
CDS
ATGGCCGATCAAAACTTAAAACAAATACAATTTAAAAGAACTAGCACAGAGAATAAAGCACCAGGTGCAGATATCGTAGCCCGTGGCGAAATTGCGTTGAATACACATGGGCGTACTCTCGCTATCTACACCAAAGATGAAGCTGATAACGTTGTTCAGCTCGCCGGTAAAGGTGTTCCTTTCTTAGATACCTCCGGAACTCTTAATGTTGATGGAACTACTACGTTAAAAGACAACGTTACTATTTCTCCGAATAAAGCRATTAGTTTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAAATGTGCTAATAACGATGGCTGGTACATTGGAGCCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAATGGGTGTAGGTTCTAATGACGTCTATATTAAAAACCAAAGAGGCTCTGGTGTTCTTCAATTAACCAATGACAGTAATCTGACATTCAGAAATTCACAGGTTTATTACGCCATGAACGGAAGAGGTCCTGGTAAATCCGGCACTCTTCTGACGAATGTAGAAAACAACCGTCAAGCATGGCAATACGTAATTTCTGCTGCAACTGCTGCAACTCCACGTTGGGTTAAAGTAGCTACAATTAAGCACCCAGGANNNNNNNNNNNNNNNNNNGATTTAATGATTACCGGTGGTATTGATTCTGGGCACGATAAGCATTATGTTGATTTTATCACGTTATCTGGTCGCAATTTAACGTCCTGGAGCACTAGCAATTTAGATAACTGGGTTGAATGGCGCAGGATTGGTTCTCCTAGTAAAGCAAACGTTCCAGAGTATTACGTTGTTAAAAACGATGCTGCTACAGATTCAGAGGCTTCATTTGATTTTTACGCTAAGATTCCTCGATACGGCAATGGGCTTTATGTTACAGTGCTGAACACAGCTGGATACAACGGACAAGATTCAGGTAAAGTAATTATCTATGAAACCAATCAGGATACTGGTGCTACTGCACCATCTGGAAGCATTCTTGTTTCGATGAAACAAATTTTTGACAGTTTCGCAAAACCAGATTTCGGCGATACTACCGGTACTCTTCCAGTTAATCGTGGCGGTACAGGTGCTACTAACGTAGGAGACGCTCGAAATAACTTAGGTTTAGGTACTGCTGCTGTGCGTAATGTCGGTGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAAGGCTGATGTCGGACTTGGTAATCTGACAAACGATACCCAAGTTAAGAAAGCTGGCGACACCATGACCGGTGATTTAGCTGCACCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGTTAATGCAGGGACCGGAAATGCTCATGTATGGTTTAGAACAAACGCCAATGAACGCGGTGTAATTTGGGCAACTCCGAATACAGCGGACTTGGGTCAGATTAATATTCGTGCAAAAACTACTGGAGGCACTTCTGCCGGTGATTTTAGCTTCCGTTCTGACGGCCGACTTGATGTTCCTGTAGCAGTTAAAGTTGGTGGAGCAGCAATGCTAACCAAAGACGGGAATATTACCTCTGGTTCGATGTTTGGTGGTAACCTTAACAACTATTTGACTTCTATTAAAAACGATATCGCCGCTGGTGATAATAAGCAAGTAAGCAAGACTGGTGATACCATGACCGGTAACTTGACTATTAACGCTAACTTAAAAGTCGAAAACCCTAATGGAACGATGGTTGATTTAGGTTCAGAGAACTCTGATAAGTATAGCAGATTAACCCTTGCACGTAAAGTTGGCTCTGGTGCTACCGTAGCAATGCTTAAAGTTACTCCTGAAGGACATGTGCAATTTGGTTATCAAGATGCAGTTGCTACTCCGGCTCCTACCAAGTACATCCGAGTTAAATCTAACGGCCTTGAGGTAGAAGGGGACTTGGTTTTTAACCAGACGTATCGCGGTACTGAAGAAGCTGTTGATATTACTGATAAGACTAATGACCTTAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATATAGCGAATAAACCTACCTCTGACGGCAACTTTGTTCTTGAAGTTCTTTCTTTGCGTAAAATTTCTGATACCGATTGGACGTGCAAACAGACCTTTACTACAAAGAACGGCGGTGTTGAAGGTACATATGTTCGATACGCACAAAACGGCTCATGGTCTGCATGGAAAGAGGTTGTTGCTGGTGTTCAACCAATCAATTTAGGTGGTACTGGAGCAACTTCTGTAGCTTCTGCCCGTAATAACCTTGGTGTTGGTGAAGGACAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATTGATGCTGATGGAAACCAAACTGTTTATGGAAATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTATTAATGCCAACGGCGGTATTATTGTTCCTACTACCAAGTATGTGCAAATTGCCGATGCTCCTACGCAGAATAACCAAGCCACTAACAAGAAATATGTTGATGATAAGGTTGCTTCTGCCATTAGTAATGCTGGTGATACTTATCTTCCGTTAGCAGGTGGTACTATAACTGGGAGGTTAACAATTACAGGTGATCAGTTAAAAACCACCTCTCTGTGGACTACCGGAGACGCCGCTGTTAACGGTGCTTTAACGGTTGATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAGCAATAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d5ac5acbad62f91dda683288bbd394844db03c50d3424c974e71eace38d2ea5b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6467
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a novel virulent Klebsiella virus vB_KpnP_TU02 infecting Klebsiella pneumoniae clinical isolate Nepal,R. and Malla,R. 2021-08-16 — GenBank